BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15506 (UTR included)
(1687 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2649_C1 1556 0.0
>BF14_2649_C1
Length = 807
Score = 1556 bits (785), Expect = 0.0
Identities = 802/807 (99%), Gaps = 1/807 (0%)
Strand = Plus / Plus
Query: 367 accaacttagtttataactcttctcttttctcc-ctatattattttttgttataccttca 425
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 1 accaacttagtttataactcttctcttttctgctnnatattattttttgttataccttca 60
Query: 426 aactagaataattgttgtaacgaaagcacattgttttaaacaaggcgttaaacagttaaa 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aactagaataattgttgtaacgaaagcacattgttttaaacaaggcgttaaacagttaaa 120
Query: 486 ctgtccataaaaacaatggcttcaccgaaggaggagagcgtaaaacgcaacagcgaaagc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgtccataaaaacaatggcttcaccgaaggaggagagcgtaaaacgcaacagcgaaagc 180
Query: 546 gaaggtgatactgaatcctcagaacatgatccgcatttcgaaccgattgtttctctaccg 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaggtgatactgaatcctcagaacatgatccgcatttcgaaccgattgtttctctaccg 240
Query: 606 cttgtagaaattccaactaacgaggaagacgaagaggaactggtgaagatacgcgcaaga 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttgtagaaattccaactaacgaggaagacgaagaggaactggtgaagatacgcgcaaga 300
Query: 666 ctttacagatatgacactcaagatcatgagtggaaggaacggggaactggtgatataaaa 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctttacagatatgacactcaagatcatgagtggaaggaacggggaactggtgatataaaa 360
Query: 726 ctgttacgtcacatagtcaataactctgtgagggtagttatgaggcgtgataagacttta 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgttacgtcacatagtcaataactctgtgagggtagttatgaggcgtgataagacttta 420
Query: 786 aaagtttgcgccaatcactttataactcctgatataagaatgaatgtgcactgtggatct 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaagtttgcgccaatcactttataactcctgatataagaatgaatgtgcactgtggatct 480
Query: 846 gataaggcatttaattggtcagttttcgctgattttgctgatgaaacttgtaaacaggaa 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gataaggcatttaattggtcagttttcgctgattttgctgatgaaacttgtaaacaggaa 540
Query: 906 ttacttgctataaaatttggcaatccacaaaatgcggaactgtggaaaacaaaatttgct 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttacttgctataaaatttggcaatccacaaaatgcggaactgtggaaaacaaaatttgct 600
Query: 966 gaggcccaggaaattgtgagaacaaaatgcattctatacacccaggaccagttttccgac 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaggcccaggaaattgtgagaacaaaatgcattctatacacccaggaccagttttccgac 660
Query: 1026 gacgagagcagttttacaagaagtgaagatactgaaacacctgatcccaaatgtgctgat 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 661 gacgagagcagttttacaagaagtgaagatactgaaacacctgatcccaaatgcgctgat 720
Query: 1086 aaaacaccagatgatgaaaacaaaaaaatcactgatcatgattccgatggagttgtttta 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaaacaccagatgatgaaaacaaaaaaatcactgatcatgattccgatggagttgtttta 780
Query: 1146 aaattgaaagaactcaaagtgaacagt 1172
|||||||||||||||||||||||||||
Sbjct: 781 aaattgaaagaactcaaagtgaacagt 807
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 296,231
Number of extensions: 7512
Number of successful extensions: 7512
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7511
Number of HSP's successfully gapped: 1
Length of query: 1687
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1670
Effective length of database: 8,119,229
Effective search space: 13559112430
Effective search space used: 13559112430
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)