BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15541 (UTR included)
(2488 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029B2F12 129 2e-29
BF01023A2A12 127 9e-29
BF01037B1H08 119 2e-26
BF01056B1D02 117 9e-26
BF01052B1H02 115 3e-25
BF01010B2F09 101 5e-21
>BF01029B2F12
Length = 749
Score = 129 bits (65), Expect = 2e-29
Identities = 113/129 (87%), Gaps = 5/129 (3%)
Strand = Plus / Plus
Query: 2108 ttataagaccaggtttcctcacgatgttttccttccctgcccttcagtggtgtctaaata 2167
|||||||||||||||||||| |||||| ||||||| | | || |||||||||||||||||
Sbjct: 543 ttataagaccaggtttcctcgcgatgtcttccttcaccgtccgtcagtggtgtctaaata 602
Query: 2168 ctcttaaaaagtacatatg-----aaaagatcacattggtacttgccaggtttcggaccc 2222
|||||| |||||||||||| | | |||||||||||||||||||||||||| ||||
Sbjct: 603 ctcttagaaagtacatatgtctctcataaatcacattggtacttgccaggtttcgaaccc 662
Query: 2223 gcgccctca 2231
|||||||||
Sbjct: 663 gcgccctca 671
>BF01023A2A12
Length = 723
Score = 127 bits (64), Expect = 9e-29
Identities = 118/135 (87%), Gaps = 7/135 (5%)
Strand = Plus / Minus
Query: 2107 attataagaccaggtttcctcacgatgttttccttccctgcccttcagtggtgtctaaat 2166
||||||||||||||||||||||||| ||| |||||| | | || ||||||||||||||||
Sbjct: 220 attataagaccaggtttcctcacgacgttctccttcaccgtccgtcagtggtgtctaaat 161
Query: 2167 actcttaaaaagtacatat------gaaaagatcacattggtacttgccaggtttcggac 2220
||| ||| ||||||||| | ||||||||||||||||||||||||||||||| ||
Sbjct: 160 actgttagaaagtacatgtgactcggaaaagatcacattggtacttgccaggtttc-aac 102
Query: 2221 ccgcgccctcacgtg 2235
|||||||||||||||
Sbjct: 101 ccgcgccctcacgtg 87
>BF01037B1H08
Length = 758
Score = 119 bits (60), Expect = 2e-26
Identities = 119/139 (85%), Gaps = 6/139 (4%)
Strand = Plus / Minus
Query: 2126 tcacgatgttttccttccctgcccttcagtggtgtctaaatactcttaaaaagtacatat 2185
||||||||||||| || | | || ||||||||| ||||||| ||||| |||||||||||
Sbjct: 222 tcacgatgttttcactcaccgtccgtcagtggtgactaaatattcttagaaagtacatat 163
Query: 2186 ga------aaagatcacattggtacttgccaggtttcggacccgcgccctcacgtgtgag 2239
|| |||||||||||||||||||||||||||||| ||||||||| |||||| ||||
Sbjct: 162 gactcggaaaagatcacattggtacttgccaggtttcgaacccgcgccttcacgtatgag 103
Query: 2240 aggaggacctttaacctcc 2258
||| || ||||||||||||
Sbjct: 102 aggcgggcctttaacctcc 84
>BF01056B1D02
Length = 778
Score = 117 bits (59), Expect = 9e-26
Identities = 117/135 (86%), Gaps = 11/135 (8%)
Strand = Plus / Minus
Query: 2107 attataagaccaggtttcctcacgatgttttccttccctgcccttcagtggtgtctaaat 2166
||||||||||||||||||||||||| |||||||||| | | |||||||||||||| |
Sbjct: 621 attataagaccaggtttcctcacgacgttttccttcaccg----tcagtggtgtctaact 566
Query: 2167 actcttaaaaagtacatatga------aaagatcacattggtacttgccaggtttcggac 2220
|| |||| ||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 565 acccttagaaagtacatatgactcggaaaagatcacattggtacttgccaggtttc-aac 507
Query: 2221 ccgcgccctcacgtg 2235
|||||||||||||||
Sbjct: 506 ccgcgccctcacgtg 492
>BF01052B1H02
Length = 790
Score = 115 bits (58), Expect = 3e-25
Identities = 133/159 (83%), Gaps = 8/159 (5%)
Strand = Plus / Plus
Query: 2107 attataagaccaggtttcctcacgatgttttccttccctgcccttcagtggtgtctaaat 2166
|||||||||||||||||||||||||||||||||||| | | || ||||| ||||||||||
Sbjct: 391 attataagaccaggtttcctcacgatgttttccttcaccgtccgtcagtagtgtctaaat 450
Query: 2167 actcttaaaaagtacatat--------gaaaagatcacattggtacttgccaggtttcgg 2218
||||||||||||| ||||| ||||||||||||| |||||| ||||| ||||
Sbjct: 451 actcttaaaaagtgcatatcattcgaaaaaaagatcacattagtacttcccaggattcga 510
Query: 2219 acccgcgccctcacgtgtgagaggaggacctttaacctc 2257
||| || |||||| || |||||| || |||||||||||
Sbjct: 511 acctgcaccctcatgtacgagaggcgggcctttaacctc 549
>BF01010B2F09
Length = 764
Score = 101 bits (51), Expect = 5e-21
Identities = 98/114 (85%), Gaps = 6/114 (5%)
Strand = Plus / Plus
Query: 2151 tcagtggtgtctaaatactcttaaaaagtacatatgaa------aagatcacattggtac 2204
||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 424 tcagtggcgtctaaatactcttagaaagtacatatgactcgatgaagatcacattggtac 483
Query: 2205 ttgccaggtttcggacccgcgccctcacgtgtgagaggaggacctttaacctcc 2258
||| ||||||||| ||||||| | |||||||||||||| | ||||||||||||
Sbjct: 484 ttgtcaggtttcgaacccgcgacttcacgtgtgagaggctggcctttaacctcc 537
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 294,098
Number of extensions: 6584
Number of successful extensions: 6584
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 6582
Number of HSP's successfully gapped: 8
Length of query: 2488
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2471
Effective length of database: 8,119,229
Effective search space: 20062614859
Effective search space used: 20062614859
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)