BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15558 (UTR included)
(1507 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01046B1A01 1574 0.0
>BF01046B1A01
Length = 814
Score = 1574 bits (794), Expect = 0.0
Identities = 809/814 (99%)
Strand = Plus / Plus
Query: 463 tggtaaaacgagaacagatataatttcccaaaataattatgtcggctactctaaaaccat 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggtaaaacgagaacagatataatttcccaaaataattatgtcggctactctaaaaccat 60
Query: 523 atttgacggcggtccgccacactcttacttccgctatgtgcctagaacacttttcgtccc 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atttgacggcggtccgccacactcttacttccgctatgtgcctagaacacttttcgtccc 120
Query: 583 aggttgtagaacgatacaataaaccagaagtggaagtgggaacaagcaaagaattgttat 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggttgtagaacgatacaataaaccagaagtggaagtgggaacaagcaaagaattgttat 180
Query: 643 taaacccagtgataatttcacgcaatgttaatgagaaagttttgattgagtcatccatta 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaacccagtgataatttcacgcaatgttaatgagaaagttttgattgagtcatccatta 240
Query: 703 attcaattaggataagtattatgattaaacaagccgatgagattgaaaagattttgtgta 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attcaattaggataagtattatgattaaacaagccgatgagattgaaaagattttgtgta 300
Query: 763 aaaaattcatgaggttcatgatgatgcgagcggaaaactttatcgtgcttcggcggaagc 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaaattcatgaggttcatgatgatgcgagcggaaaactttatcgtgcttcggcggaagc 360
Query: 823 cggttgatggttaccatatcagtttcctgataacaaatttccacactgaacaaatgtata 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cggttgatggttaccatatcagtttcctgataacaaatttccacactgaacaaatgtata 420
Query: 883 aacataaattggttgactttgttatttacttcatggaagaaattgataaagaaatcagtg 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacataaattggttgactttgttatttacttcatggaagaaattgataaagaaatcagtg 480
Query: 943 aaatgaaattagcggtcaatgcgcgtgccagaatttgttcagaagaatttttgaagagat 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaatgaaattagcggtcaatgcgcgtgccagaatttgttcagaagaatttttgaagagat 540
Query: 1003 tttgaataaattttccaaaatatatactgaataataattctcatcatgtactgtagccct 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttgaataaattttccaaaatatatactgaataataattctcatcatgtactgtagccct 600
Query: 1063 atttcttgtgctggatttctttgcatgaaggtgacaagatattccattttaagtgagata 1122
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atttcttgtgctggatttctctgcatgaaggtgacaagatattccattttaagtgagata 660
Query: 1123 agttttttgctttattattcattatgtttcatgggggcctatccggtgaataatcaatgg 1182
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 661 agttttttgctttattattcattatgtttcatgggggcctatctggtgaataatcaatgg 720
Query: 1183 cttcacatacaggagtagtataagcaacctgaagtcggctttgtcaaagttaaaaatcaa 1242
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 721 cttcacatacaggagtagtataagcaacctggagtcggctttgtcaaagttaaaaatcaa 780
Query: 1243 ttgaatgtaatgcaatgtactgacataatattga 1276
||||||||| ||||||| ||||||||||||||||
Sbjct: 781 ttgaatgtattgcaatgcactgacataatattga 814
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,229
Number of extensions: 4108
Number of successful extensions: 4108
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4108
Number of HSP's successfully gapped: 1
Length of query: 1507
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1490
Effective length of database: 8,119,229
Effective search space: 12097651210
Effective search space used: 12097651210
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)