BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15560 (UTR included)
(1453 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060A1E02 1409 0.0
>BF01060A1E02
Length = 769
Score = 1409 bits (711), Expect = 0.0
Identities = 744/755 (98%)
Strand = Plus / Plus
Query: 699 tttatcgatgaacacgctctttctgagcattttaaaacgaaggtacataaaaggagatta 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tttatcgatgaacacgctctttctgagcattttaaaacgaaggtacataaaaggagatta 61
Query: 759 aaggcattggagcttgagccttactccatagaagaatctgagagagccgcggggcatgga 818
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 62 aaggcattggagcttgagccttattccatagaagaatctgagagagccgcggggcatggc 121
Query: 819 aacttcaagctgcctaataaacgtaaaattgtcacacaagaaactaaacacatagaaaac 878
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aacttcaagttgcctaataaacgtaaaattgtcacacaagaaactaaacacatagaaaac 181
Query: 879 gaagacataacagaacaggattcagaggaagttagcccaagcaaaaagaaaaagtcagaa 938
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 182 gaagacataacagaacaggattcagaggaagttagtccaagcaaaaagaaaaaatcagaa 241
Query: 939 gaaaatgctacataaaacatgtaagctcattcttagtactaagatctatgagtttaataa 998
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 242 gaaaatgctacataaaacatgtaagctcattcttagtactaagatccatgagtttaataa 301
Query: 999 aatcaataaaagatcctctgccctatttatcaatagccttaaagcaaccgataattttgc 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aatcaataaaagatcctctgccctatttatcaatagccttaaagcaaccgataattttgc 361
Query: 1059 ttatataacaccacatgttgattatcaggaaagaattaagaacaaagaactactgcaaaa 1118
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttatataacaccacacattgattatcaggaaagaattaagaacaaagaactactgcaaaa 421
Query: 1119 taatttggacaaaagaaagtcaaagattgttcttaataaaatagaaaatctgtggtccat 1178
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 422 taatttggacaaaagaaagtcaaagattgttcagaataaaatagaaaatctgtggtccat 481
Query: 1179 ttatgaagatttaaaaaatcgaaaattacaattggaagaaaggaaaagtgttgtatccaa 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttatgaagatttaaaaaatcgaaaattacaattggaagaaaggaaaagtgttgtatccaa 541
Query: 1239 agaattaggagtactgattaattctaaacaacaaggtgaccatgttgaaaaattaaaaat 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agaattaggagtactgattaattctaaacaacaaggtgaccatgttgaaaaattaaaaat 601
Query: 1299 ccagaatagtctattaaaagaaaacgttaacaaattaaaaattccattgtggtcagcgga 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ccagaatagtctattaaaagaaaacgttaacaaattaaaaattccattgtggtcagcgga 661
Query: 1359 ggagactgctgttgaggaatatttaaaattaccaaatgaattacaccctttaactccatg 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ggagactgctgttgaggaatatttaaaattaccaaatgaattacaccctttaactccatg 721
Query: 1419 tttcaataaaaatataatctatgaatatggatcta 1453
||| |||||||||||||||||||||||||||||||
Sbjct: 722 ttttaataaaaatataatctatgaatatggatcta 756
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 254,229
Number of extensions: 6099
Number of successful extensions: 6099
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6099
Number of HSP's successfully gapped: 1
Length of query: 1453
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1436
Effective length of database: 8,119,229
Effective search space: 11659212844
Effective search space used: 11659212844
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)