BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15561 (UTR included)
(3115 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1B09 100 3e-20
BF01044B2E12 88 1e-16
BF14_729_C3 84 2e-15
BF01012A1E04 82 6e-15
BF01052B1F12 76 4e-13
BF01049B2H03 70 2e-11
BF01025A1D01 70 2e-11
>BF01012A1B09
Length = 841
Score = 99.6 bits (50), Expect = 3e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 2956 tttaaaataataaaatccgcgtagtatatccgaaaaatattagtttcatttaaatgaa 3013
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 790 tttaaaataataaaatccgcgtagtgtatccgaaatatattagtttcatttaaatgaa 733
Score = 69.9 bits (35), Expect = 2e-11
Identities = 51/55 (92%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2885 tttcggataaactacgcggattttatttttttaaaaacttcataatcccgacgtt 2939
||||||||| ||||||||||||||||| |||| |||||| |||||||||||||||
Sbjct: 756 tttcggatacactacgcggattttattatttt-aaaactacataatcccgacgtt 809
>BF01044B2E12
Length = 823
Score = 87.7 bits (44), Expect = 1e-16
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 2960 aaataataaaatccgcgtagtatatccgaaaaatattagtttcatttaaatg 3011
|||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 34 aaataataaaatccgcgtagtaaatccgaaaaatactagtttcatttaaatg 85
>BF14_729_C3
Length = 2041
Score = 83.8 bits (42), Expect = 2e-15
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 2960 aaataataaaatccgcgtagtatatccgaaaaatattagtttcatttaaatgaa 3013
|||||||||||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 1651 aaataataaaatccgcgtagtatatccgaataatactagcttcatttaaatgaa 1704
Score = 67.9 bits (34), Expect = 9e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 2886 ttcggataaactacgcggattttatttttttaaaaacttcataatcccgacgtt 2939
|||||||| ||||||||||||||| || |||||||||| |||||||||||||||
Sbjct: 1680 ttcggatatactacgcggatttta-ttatttaaaaactacataatcccgacgtt 1628
>BF01012A1E04
Length = 841
Score = 81.8 bits (41), Expect = 6e-15
Identities = 48/49 (97%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 2966 taaaatccgcgtagtatatccgaaaa-atattagtttcatttaaatgaa 3013
|||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 543 taaaatccgcgtagtatatccgaaaatatattagtttcatttaaatgaa 591
>BF01052B1F12
Length = 785
Score = 75.8 bits (38), Expect = 4e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 2964 aataaaatccgcgtagtatatccgaaaaatattagtttcatttaaatgaa 3013
||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 374 aataaaagacgcgaagtatatccgaaaaatattagtttcatttaaatgaa 325
>BF01049B2H03
Length = 832
Score = 69.9 bits (35), Expect = 2e-11
Identities = 48/51 (94%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 2963 taataaaatccgcgtagtatatccgaaaaatattagtttcatttaaatgaa 3013
||||||||| ||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 278 taataaaatacgcttagta-atccgaaaaatattagtttcatttaaatgaa 327
>BF01025A1D01
Length = 764
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 2979 gtatatccgaaaaatattagtttcatttaaatgaa 3013
|||||||||||||||||||||||||||||||||||
Sbjct: 404 gtatatccgaaaaatattagtttcatttaaatgaa 370
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 366,452
Number of extensions: 7537
Number of successful extensions: 7537
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 7534
Number of HSP's successfully gapped: 9
Length of query: 3115
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3097
Effective length of database: 8,109,745
Effective search space: 25115880265
Effective search space used: 25115880265
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)