BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15569 (UTR included)
(1858 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059B1B05 1467 0.0
>BF01059B1B05
Length = 793
Score = 1467 bits (740), Expect = 0.0
Identities = 778/793 (98%)
Strand = Plus / Plus
Query: 574 atttagaagcggagttgtatgcgtttggtaagcgactgaacgaagaattcgattcggatc 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttagaagcggagttgtatgcgtttggtaagcgactgaacgaagaattcgattcggatc 60
Query: 634 ttttgcttcaagcgtttaccgaccgttcatatgtaattaaagaagaaatgaaacaaaagg 693
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttgcttcaagtgtttaccgaccgttcatatgtaattaaagaagaaatgaaacaaaagg 120
Query: 694 aattggaaattgacctcaaaatgaaagacaatagggagttggctgaggaagggcggaagt 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aattggaaattgacctcaaaatgaaagacaatagggagttggctgaggaagggcggaagt 180
Query: 754 ttatgcaagaatatattcaattgtatttggagacagtgttgcacaaactaccagaagagg 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttatgcaagaatatattcaattgtatttggagacagtgttgcacaaactaccagaagagg 240
Query: 814 gaattatgtgtataagaaatcacctgattagtgaaaaagtaatttcaaatgtatcgttgc 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 241 gaattatgtgtataagaaatcacctgattagtgaaaaagtaatttcaaatgtatcattgc 300
Query: 874 acttgggaacaaaggatataatcttagcagctgaatatccagtcgacaatagtatattgg 933
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 301 acttgggaacaaaggatataatcttagcagctgaatatccagtcgataatagtatattgg 360
Query: 934 caaaaacatttgaggctattgttggagctctgctacaatcgtctggagaggaaagagcag 993
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 361 caaaaacatttgaggctattgttggagctctgctacagtcgtctggagaggaaagagcag 420
Query: 994 cacattttgtgagagattttgtcatcacacaactccaaggtcaagatgtaaatgaattct 1053
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cacattttgtcagagattttgtcatcacacaactccaaggtcaagatgtaaatgaattct 480
Query: 1054 gggaaattgaagatccctggtccatgctcaccgagatgatatcaaaaactggtggggttt 1113
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggtaattgaagatccctggtccatgctcaccgagatgatatcaaaaactggtggggttt 540
Query: 1114 tagaacctagactaattggagaggttgctaagaacacactacttgcatgctacagagtgg 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tagaacctagactaattggagaggttgctaagaacacactacttgcatgctacagagtgg 600
Query: 1174 gtctttatttggacaagaaaatgatgtcagctggctttggtgaaacagttgctattgcta 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtctttatttggacaagaaaatgatgtcagctggctttggtgaaacagttgctattgcta 660
Query: 1234 aggaaatggcggccagagaagcgctcaaaaagatattcggcacagaagaaacaatgcatc 1293
|||||||||||||||||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 661 aggaaatggcggccagagaagcactcaaaaagatatttggcacagannnnncaatgcatc 720
Query: 1294 ccataaactttaagcttaatggcatacctaaatcgaggtctcaaagtaaattatctgcaa 1353
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 721 ccataaactttaagcttaatggcatacctaaatcgaggtctcaaagtaaannatctgcaa 780
Query: 1354 gttaatttttgtc 1366
|||||||||||||
Sbjct: 781 gttaatttttgtc 793
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 270,471
Number of extensions: 6166
Number of successful extensions: 6166
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6165
Number of HSP's successfully gapped: 1
Length of query: 1858
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1841
Effective length of database: 8,119,229
Effective search space: 14947500589
Effective search space used: 14947500589
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)