BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15588 (UTR included)
(1831 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034A2C01 1437 0.0
>BF01034A2C01
Length = 794
Score = 1437 bits (725), Expect = 0.0
Identities = 748/755 (99%), Gaps = 1/755 (0%)
Strand = Plus / Plus
Query: 486 aactacggtatcaaaatggctcgaagaccagaacatcaagcaccacccgaaatttt-tta 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 40 aactacggtatcaaaatggctcgaagaccagaacatcaagcaccacccgaaattttttta 99
Query: 545 taatgaagatgaagcgagaaagtatacacaaaacactaggatcatagacattcaggggca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 taatgaagatgaagcgagaaagtatacacaaaacactaggatcatagacattcaggggca 159
Query: 605 gatgactgaaagatgcatagaattattgatactccctgaagataccccatgtttgctgtt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gatgactgaaagatgcatagaattattgatactccctgaagataccccatgtttgctgtt 219
Query: 665 ggatattggatgtggatcaggcttatccggaactgtattagaagaaaatggacatatgtg 724
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 220 ggatattggatgtggatcaggcttatccggaactgtattagaagaaaatggacacatgtg 279
Query: 725 gattggattagacatttcccctgccatgttagatgtagctttagagagggagaccgaggg 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gattggattagacatttcccctgccatgttagatgtagctttagagagggagaccgaggg 339
Query: 785 tgacctcattctttcagacatgggtcaaggagtgccatttaaggctggcagctttgatgg 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgacctcattctttcagacatgggtcaaggagtgccatttaaggctggcagctttgatgg 399
Query: 845 tgcagtctccgtgtctgctatacagtggctgtttaatgcagacaaaaaatcacacaatcc 904
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tgcagtctctgtgtctgctatacagtggctgtttaatgcagacaaaaaatcacacaatcc 459
Query: 905 agtcaaaagactttataatttcttcagttctttatatgcctcactgtcaaggtcagcaag 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 agtcaaaagactttataatttcttcagttctttatatgcctcactgtcaaggtcagcaag 519
Query: 965 ggcagtgtttcaattttaccctgaaaatgagagtcagttagatctgttaacatctcaagc 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggcagtgtttcaattttaccctgaaaatgagagtcagttagatctgttaacatctcaagc 579
Query: 1025 catgaaggcaggtttctatggaggagttgttgttgattaccctaactcggctaaggcgaa 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 580 catgaaggcaggtttctatggaggagttgttgttgattaccctaactcggctaaggctaa 639
Query: 1085 gaaattcttcttagtgttaatgacgggaggtgcagcacctttgcctcaagctcttggtac 1144
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 640 gaaattcttcttagtgttaatgacgggaggtgcagcgcctttgcctcaagctcttggtac 699
Query: 1145 agatgaaagtaataattcattacaagttaaatatgctaaaagggaagccatgagagctgc 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 agatgaaagtaataattcattacaagttaaatatgctaaaagggaagccatgagagctgc 759
Query: 1205 aagagggaaacctttaaaaaatactaaagcttggt 1239
|||| |||||||||||||||||||||||||||||
Sbjct: 760 aaganngaaacctttaaaaaatactaaagcttggt 794
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 255,978
Number of extensions: 6025
Number of successful extensions: 6025
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6024
Number of HSP's successfully gapped: 1
Length of query: 1831
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1814
Effective length of database: 8,119,229
Effective search space: 14728281406
Effective search space used: 14728281406
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)