BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15589 (UTR included)
(3181 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2735_C1 2300 0.0
>BF14_2735_C1
Length = 1204
Score = 2300 bits (1160), Expect = 0.0
Identities = 1194/1204 (99%), Gaps = 1/1204 (0%)
Strand = Plus / Plus
Query: 901 ctactgtcactgatgaaggattgtgccgtgttggctggtcagcaccaggtgctaacctgg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctactgtcactgatgaaggattgtgccgtgttggctggtcagcaccaggtgctaacctgg 60
Query: 961 atcttgggacagaccggcttggttttggatttggtggcactgggaaaaaatcaaattgta 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcttgggacagaccggcttggttttggatttggtggcactgggaaaaaatcaaattgta 120
Query: 1021 aacaatttgatgactatggagaggcttatggcaagaatgatgtaattggttgtctactta 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacaatttgatgactatggagaggcttatggcaagaatgatgtaattggttgtctactta 180
Query: 1081 atctaaacaatggtgatatacgtttttacaagaatggtcaagatttggggttggcattta 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atctaaacaatggtgatatacgtttttacaagaatggtcaagatttggggttggcattta 240
Query: 1141 aactggatcagtctcgtagatcagactgttatttcccagccgtg-gtgctgaagaatgcg 1199
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 241 aactggatcagtctcgtagatcagactgttatttcccagccgtgtgtgctcaagaatgcg 300
Query: 1200 gaaataagttttaattttggcaacacaccctttaagtatccacctaactgtgaatacatt 1259
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 301 gaaataagttttaattttggcaacacaccctttaagtatccacctaactgtgaacacatt 360
Query: 1260 gctatagcaaatgctccaagagaatatgtcaaaaacaacccagtttgttctgtggcatgt 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctatagcaaatgctccaagagaatatgtcaaaaacaacccagtttgttctgtggcatgt 420
Query: 1320 gaaggagcaaaacaagtcaataatgcaccccaggctattataattgagccatcacgagag 1379
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaggagcaaaacaagtcaacaatgcaccccaggctattataattgagccatcacgagag 480
Query: 1380 ttagcagaacaaacatgcaatcagattacactgttcaagaagtatatagataatccaaaa 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttagcagaacaaacatgcaatcagattacactgttcaagaagtatatagataatccaaaa 540
Query: 1440 ataagagagcttttagtcgcgggcggtataaatgtgaaggatcaaataagtcaactcaat 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ataagagagcttttagtcgcgggcggtataaatgtgaaggatcaaataagtcaactcaat 600
Query: 1500 gctggtatagacattgttgttggcacacccggcaggattgaagatctcattcaaggaggc 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gctggtatagacattgttgttggcacacccggcaggattgaagatctcattcaaggaggc 660
Query: 1560 tacctggcgctaacccactgtcggttctttgtgctggatgaggctgatgggttgctcaag 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tacctggcgctaacccactgtcggttctttgtgctggatgaggctgatgggttgctcaag 720
Query: 1620 tctggttgcggcgacatgatcgaacgtctccatagacagataccgaaggtcacttcagac 1679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tctggttgcggcgacatgatcgaacgtctccatagacagataccgaaggtcacttcagac 780
Query: 1680 gggagacgcctccagatggttgtctgctctgctacattacacgctttcgaagttaagaaa 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gggagacgcctccagatggttgtctgctctgctacattacacgctttcgaagttaagaaa 840
Query: 1740 atggcggaaaaactaatgcatttccccacatgggtggatctgaaaggcgaagattcagtg 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 atggcggaaaaactaatgcatttccccacatgggtggatctgaaaggcgaagattcagtg 900
Query: 1800 ccggagacagttcatcatgtcgtggtgaatgttgatccacaggaagacaaatcctgggag 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ccggagacagttcatcatgtcgtggtgaatgttgatccacaggaagacaaatcctgggag 960
Query: 1860 acagcacagaaaaaaatactgaccgacggtgttcatgccagagacaatatagataacatg 1919
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 961 acagcacagaaaaaaatactgacagacggtgttcatgccagagacaatatagataacatg 1020
Query: 1920 tcgccagagaccctgtcggaggctgttaaggtactcaaaggaacgtactgtgtacgagcc 1979
||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1021 tcgccggagactctgtcggaggctgtgaaggtactcaaaggaacgtactgtgtacgagcc 1080
Query: 1980 atcagagcacacaagatggacagagccataatcttctgccgtacgaagctggactgtgat 2039
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 1081 atcagagcacacaagatggacagagccataatcttctgccgtactaagctggactgcgat 1140
Query: 2040 aacatggagcggttcttgaagtctttcggtgaagacttctcttgtgtatgtcttcacagt 2099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aacatggagcggttcttgaagtctttcggtgaagacttctcttgtgtatgtcttcacagt 1200
Query: 2100 gata 2103
||||
Sbjct: 1201 gata 1204
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 376,655
Number of extensions: 7853
Number of successful extensions: 7853
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7852
Number of HSP's successfully gapped: 1
Length of query: 3181
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3163
Effective length of database: 8,109,745
Effective search space: 25651123435
Effective search space used: 25651123435
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)