BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15591 (UTR included)
(2173 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031A2H10 1203 0.0
BF01061A2C06 260 8e-69
>BF01031A2H10
Length = 647
Score = 1203 bits (607), Expect = 0.0
Identities = 610/611 (99%)
Strand = Plus / Plus
Query: 645 ttgctggcttataacttcaagttaaattgcttaaaagccaatgttacactatcgcaaatt 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 ttgctggcttataacttcaagttaaattgcttaaaagccaatgttacactatcgcaaatt 96
Query: 705 tttaccatacaatctacgtcaaataatttgcagagtgatgacttaaattcaattgatata 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tttaccatacaatctacgtcaaataatttgcagagtgatgacttaaattcaattgatata 156
Query: 765 aatgttgtttatcaggaccatgaatatgatgttcctctctttaatagtcacccagccatt 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 aatgttgtttatcaggaccatgaatatgatgttcctctctttaatagtcacccagccatt 216
Query: 825 gattttgcacctgaaatacctgaaaataaggaactaacacccctacctccagtgactgaa 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gattttgcacctgaaatacctgaaaataaggaactaacacccctacctccagtgactgaa 276
Query: 885 ataacatcaacagagggacttcagcgtaaagaggcagaaaagcgctattcatgtacttta 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ataacatcaacagagggacttcagcgtaaagaggcagaaaagcgctattcatgtacttta 336
Query: 945 tgtacaaagtcatttactaggatatacagtctgagatatcatatggcaaaacatactgat 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tgtacaaagtcatttactaggatatacagtctgagatatcatatggcaaaacatactgat 396
Query: 1005 ttccgcaaatatctctgcccaagatgtggtaaaacattccacacatctagtggtttaagg 1064
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 397 ttccgcaaatatctctgcccaagatgtggtaaaacattccacacatctagtggtttgagg 456
Query: 1065 cagcatttagtgtcccatattgacatcaatcagtttaaatgtggtttctgcaacaaaact 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cagcatttagtgtcccatattgacatcaatcagtttaaatgtggtttctgcaacaaaact 516
Query: 1125 tacaaatcaaggcagtctctaaaagaacattttagggtggctcattccagtaatcgcaaa 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tacaaatcaaggcagtctctaaaagaacattttagggtggctcattccagtaatcgcaaa 576
Query: 1185 ttgtttgcttgtgttacttgtgacaagagattcacagcaaaatctacattgatgatgcat 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ttgtttgcttgtgttacttgtgacaagagattcacagcaaaatctacattgatgatgcat 636
Query: 1245 atcaagattca 1255
|||||||||||
Sbjct: 637 atcaagattca 647
>BF01061A2C06
Length = 239
Score = 260 bits (131), Expect = 8e-69
Identities = 134/135 (99%)
Strand = Plus / Plus
Query: 1618 gcaatgttatttcagagcatgtagttgatttttgctcaccagtatcaatcatttaaatag 1677
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 81 gcaatgttatttcagagcatgtagttgatttttgctcaccggtatcaatcatttaaatag 140
Query: 1678 aattgttagaatatcacaagctttgttttcataaagtttaaggaaatttaagtttaaaat 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 aattgttagaatatcacaagctttgttttcataaagtttaaggaaatttaagtttaaaat 200
Query: 1738 aaagatgtaaccgtg 1752
|||||||||||||||
Sbjct: 201 aaagatgtaaccgtg 215
Score = 129 bits (65), Expect = 2e-29
Identities = 65/65 (100%)
Strand = Plus / Minus
Query: 1583 attgcagaagcatgttagggcccataatgcccagagcaatgttatttcagagcatgtagt 1642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 attgcagaagcatgttagggcccataatgcccagagcaatgttatttcagagcatgtagt 26
Query: 1643 tgatt 1647
|||||
Sbjct: 25 tgatt 21
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 280,874
Number of extensions: 5261
Number of successful extensions: 5261
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5261
Number of HSP's successfully gapped: 3
Length of query: 2173
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2156
Effective length of database: 8,119,229
Effective search space: 17505057724
Effective search space used: 17505057724
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)