BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15600 (UTR included)
(2602 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030B1D05 1441 0.0
>BF01030B1D05
Length = 746
Score = 1441 bits (727), Expect = 0.0
Identities = 741/746 (99%)
Strand = Plus / Plus
Query: 488 catcttaaataatatgaagagtattattataattttagcgattttatgcgctgtagatat 547
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 catcttaaataatatgaagagtattattatatttttagcgattttatgcgctgtagatat 60
Query: 548 tacagtacagagatcgactccagaagctgacagctatgttgcagctgttgttgaatacca 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacagtacagagatcgactccagaagctgacagctatgttgcagctgttgttgaatacca 120
Query: 608 ggtgcagagcaatgtggagacgaacttgaggaattacatcaatttaatacaagatgctgc 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtgcagagcaatgtggagacgaacttgaggaattacatcaatttaatacaagatgctgc 180
Query: 668 atcccagaatgctgacattgtggtatttcccgagatgaccttgacaagaggcaacagcgt 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcccagaatgctgacattgtggtatttcccgagatgaccttgacaagaggcaacagcgt 240
Query: 728 tgtcatccccatccatggcttgcttaaagataatcccataccagctttggcgccagaatt 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtcatccccatccatggcttgcttaaagataatcccataccagctttggcgccagaatt 300
Query: 788 gtatgatgagatccttgtatcaatatcagctgcggcaagacagaatgagatatatgttgt 847
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtatgatgagatcctagtatcaatatcagctgcggcaagacagaatgagatatatgttgt 360
Query: 848 tatcaacgttcaagagatactcaattgtacaaatccccaagctgagggtgagaactgccc 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tatcaacgttcaagagatactcaattgtacaaatccccaagctgagggtgagaactgccc 420
Query: 908 agaacagaaacaatacttgttcaatacgaatgtcgtattcaacaggtcgggagcggttat 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agaacagaaacaatacttgttcaatacgaatgtcgtattcaacaggtcgggagcggttat 480
Query: 968 tgataggtatcgaaaaataaatctcttcggtgaattcactcgtacaccggcactttcacc 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgataggtatcgaaaaataaatctcttcggtgaattcactcgtacaccggcactttcacc 540
Query: 1028 agatcttggggtgttcgagacagacttcggagttactttcggtcactacatttgctttga 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agatcttggggtgttcgagacagacttcggagttactttcggtcactacatttgctttga 600
Query: 1088 ccttatgttccaagttcccgctatacaggttgttgaaaaaatgaacattactgacatcgt 1147
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 601 ccttatgttccaagttcccgctatacaggttgttgaaaaaatgaatattactgacatcgt 660
Query: 1148 cttcagtactatgtggttttctgaaatgccttatctaaccgccgtccagattcagcaggc 1207
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 661 cttcagtactatgtggttttctgaaatgccttatctaactgccgtccagatncagcaggc 720
Query: 1208 ctacgcttactccatgaacgttaatt 1233
||||||||||||||||||||||||||
Sbjct: 721 ctacgcttactccatgaacgttaatt 746
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 370,812
Number of extensions: 8607
Number of successful extensions: 8607
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8607
Number of HSP's successfully gapped: 1
Length of query: 2602
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2585
Effective length of database: 8,119,229
Effective search space: 20988206965
Effective search space used: 20988206965
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)