BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15641 (UTR included)
(1891 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B2E03 775 0.0
BF01017A1A10 710 0.0
>BF01056B2E03
Length = 783
Score = 775 bits (391), Expect = 0.0
Identities = 391/391 (100%)
Strand = Plus / Minus
Query: 1501 atttagcttatctcattgtcaccaaaataatatactattcataaataataactaacaaaa 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 atttagcttatctcattgtcaccaaaataatatactattcataaataataactaacaaaa 724
Query: 1561 ttaatttcaaatataaattctttaaaaatctatctactagaattcgggcaatgcaaacat 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ttaatttcaaatataaattctttaaaaatctatctactagaattcgggcaatgcaaacat 664
Query: 1621 tctacttgaatttataaataataattacaacatgtatatctacaaaacatatatacacag 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tctacttgaatttataaataataattacaacatgtatatctacaaaacatatatacacag 604
Query: 1681 acattcatattgatttactgataggagttctgttgtttggcagcttagcttccaaattct 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 acattcatattgatttactgataggagttctgttgtttggcagcttagcttccaaattct 544
Query: 1741 gccacctgctgggtggccaaactatgcaaagggctttagcattaatcagacctaatgata 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gccacctgctgggtggccaaactatgcaaagggctttagcattaatcagacctaatgata 484
Query: 1801 ccggaccaaatgtgttgctatccaatgtatgacctgtgtgatcaccttcaacccaacagt 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ccggaccaaatgtgttgctatccaatgtatgacctgtgtgatcaccttcaacccaacagt 424
Query: 1861 ggccttcagggatttttacatattgattctt 1891
|||||||||||||||||||||||||||||||
Sbjct: 423 ggccttcagggatttttacatattgattctt 393
>BF01017A1A10
Length = 719
Score = 710 bits (358), Expect = 0.0
Identities = 361/362 (99%)
Strand = Plus / Plus
Query: 325 atgtgattaccgttacgaacaatttaggatattacactgaaaattatgttactttagcaa 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtgattaccgttacgaacaatttaggatattacactgaaaattatgttactttagcaa 60
Query: 385 aattatttatatatatatctctctaaaaagttaaaatcaaactattttgcagcaaatgtt 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aattatttatatatatatctctctaaaaagttaaaatcaaactattttgcagcaaatgtt 120
Query: 445 accataatttttgatagaaaataatgttattctgcccaacctgtgcaaatattcttatgg 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accataatttttgatagaaaataatgttattctgcccaacctgtgcaaatattcttatgg 180
Query: 505 ttgaagaagcttttgaatcatcactacggtatggttgtaatacttgcccctatatataca 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgaagaagcttttgaatcatcactacggtatggttgtaatacttgcccctatatataca 240
Query: 565 atatacggaggaaagtctcgtcgcgcacattcccaaaattaaaggaattagattatatca 624
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 241 atatacggaggaaagtctcgtcgcgcacattcccaaaattaaaggaattagattatatta 300
Query: 625 tgggtggtgctgctgcatgggagaatgtagattcaaccgatgctgtgtgcccaaagtgtg 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgggtggtgctgctgcatgggagaatgtagattcaaccgatgctgtgtgcccaaagtgtg 360
Query: 685 ct 686
||
Sbjct: 361 ct 362
Score = 381 bits (192), Expect = e-105
Identities = 192/192 (100%)
Strand = Plus / Plus
Query: 690 gtgaggtataaaagtgtgatgtcaactatgaaaattgataaaatggcatcaatatttccc 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gtgaggtataaaagtgtgatgtcaactatgaaaattgataaaatggcatcaatatttccc 587
Query: 750 tgtgatgatgtgtcgtcatatgttaaagcggcagaataccttgaaaaaggagaggttata 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tgtgatgatgtgtcgtcatatgttaaagcggcagaataccttgaaaaaggagaggttata 647
Query: 810 gctgtgccaacagacacaatttatgggctcgcttgtagtgctaaatgtccagaagcaata 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 gctgtgccaacagacacaatttatgggctcgcttgtagtgctaaatgtccagaagcaata 707
Query: 870 aaaaagctttat 881
||||||||||||
Sbjct: 708 aaaaagctttat 719
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,559
Number of extensions: 15154
Number of successful extensions: 15154
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 15154
Number of HSP's successfully gapped: 3
Length of query: 1891
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1874
Effective length of database: 8,119,229
Effective search space: 15215435146
Effective search space used: 15215435146
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)