BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15660 (UTR included)
(2590 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049A1A02 1229 0.0
>BF01049A1A02
Length = 787
Score = 1229 bits (620), Expect = 0.0
Identities = 629/632 (99%)
Strand = Plus / Plus
Query: 583 ctgattacaatattcccagagccgtcaaagatgctgtttttgttaaagtaccaacggagc 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgattacaatattcccagagccgtcaaagatgctgtttttgttaaagtaccaacggagc 60
Query: 643 cccttactggaaaaattgatcttgtctgtgtgtccaatgatgcattgactgacattctcg 702
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccttactggaaaaatttatcttgtctgtgtgtccaatgatgcattgactgacattctcg 120
Query: 703 atcttgatcctgtagtagcggagagtgaggaatttgtcgaattcataaatggcaaatatt 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcttgatcctgtagtagcggagagtgaggaatttgtcgaattcataaatggcaaatatt 180
Query: 763 tacctcaaggtgctctgagtgtatgtcatggatatggtgggtatcaatttggtttttggg 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tacctcaaggtgctctgagtgtatgtcatggatatggtgggtatcaatttggtttttggg 240
Query: 823 ctgaccagcttggagatggtagggcacatattcttggtgaatatgttaatagtaaaggag 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgaccagcttggagatggtagggcacatattcttggtgaatatgttaatagtaaaggag 300
Query: 883 agttatggcagttgcagttaaagggttccggtgagactcccttttctcgtttcggtgacg 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agttatggcagttgcagttaaagggttccggtgagactcccttttctcgtttcggtgacg 360
Query: 943 gtcgtgcagtactcagatcatcgctgcgtgagatggtagctagcgaggcatgccaccacc 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcgtgcagtactcagatcatcgctgcgtgagatggtagctagcgaggcatgccaccacc 420
Query: 1003 ttggcattcctaccaccagggccgcaggattggtggcaagtgattcccacaaggtcctgc 1062
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 421 ttggcattcctaccaccagggccgcagcattggtggcaagtgattcccacaaggtcctgc 480
Query: 1063 gagataggagttacagtggtctggcccgtcccgagcgggcggctgtgctactccgactgg 1122
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 481 gagataggagttacagtggtctggcccgtcccgagcgggcggctgtggtactccgactgg 540
Query: 1123 cacctagttggatgaggattggaagtttcgagttaatgcaccgcaggcaacagacagaca 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cacctagttggatgaggattggaagtttcgagttaatgcaccgcaggcaacagacagaca 600
Query: 1183 tgttggtcgagcttgctgatcatgttataaag 1214
||||||||||||||||||||||||||||||||
Sbjct: 601 tgttggtcgagcttgctgatcatgttataaag 632
Score = 313 bits (158), Expect = 8e-85
Identities = 158/158 (100%)
Strand = Plus / Plus
Query: 1312 aagggcttggcttcactcatggggttcttaacacagacaacatcagtatattgggtctga 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aagggcttggcttcactcatggggttcttaacacagacaacatcagtatattgggtctga 689
Query: 1372 ccattgactatggaccgtttgggttcatagaacactattatgagaattatgttccaaact 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ccattgactatggaccgtttgggttcatagaacactattatgagaattatgttccaaact 749
Query: 1432 cgtccgacgatatgggaagatatgcatttaacaaacag 1469
||||||||||||||||||||||||||||||||||||||
Sbjct: 750 cgtccgacgatatgggaagatatgcatttaacaaacag 787
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 393,035
Number of extensions: 9335
Number of successful extensions: 9335
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9335
Number of HSP's successfully gapped: 2
Length of query: 2590
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2573
Effective length of database: 8,119,229
Effective search space: 20890776217
Effective search space used: 20890776217
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)