BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15663 (UTR included)
(2089 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039A1F03 1384 0.0
BF01018A2F12 674 0.0
>BF01039A1F03
Length = 698
Score = 1384 bits (698), Expect = 0.0
Identities = 698/698 (100%)
Strand = Plus / Plus
Query: 867 ttcctctgggacaccatactggcgagcttccagggcaaaaaaggtgctatactgacaaca 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcctctgggacaccatactggcgagcttccagggcaaaaaaggtgctatactgacaaca 60
Query: 927 cattccatggaagaggctgatgcgttatgttctagagttgggattatggtgaaaggaggt 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cattccatggaagaggctgatgcgttatgttctagagttgggattatggtgaaaggaggt 120
Query: 987 ttgaggtgtatcggttccacgcaacatttgaaaaatttgtacggcgcgggttacacgtta 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgaggtgtatcggttccacgcaacatttgaaaaatttgtacggcgcgggttacacgtta 180
Query: 1047 gagatgaagataggacaaaacaaccagaaatcaacgatgttagaaacagatctgtctatg 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagatgaagataggacaaaacaaccagaaatcaacgatgttagaaacagatctgtctatg 240
Query: 1107 actccatcacctctgcggtctcaagacaactcaccgtccttggaagaggctgatgaagct 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 actccatcacctctgcggtctcaagacaactcaccgtccttggaagaggctgatgaagct 300
Query: 1167 ggctccggtcaaggttctggtgggggtgattgtgggcgcgaaggggatattgagggtgaa 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggctccggtcaaggttctggtgggggtgattgtgggcgcgaaggggatattgagggtgaa 360
Query: 1227 ggtgagggtgagggtgaggctgtggatgtcagcattcacacaccgctggtcgggaacaca 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggtgagggtgagggtgaggctgtggatgtcagcattcacacaccgctggtcgggaacaca 420
Query: 1287 ccgtctatgagactgcatcatcagcgtactgagtctagtggtggcgcgtgtgctgaggca 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccgtctatgagactgcatcatcagcgtactgagtctagtggtggcgcgtgtgctgaggca 480
Query: 1347 gcgatcgcgctggtgggctcactgttcccggccgccacgctcgaggagagcttcgctgag 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcgatcgcgctggtgggctcactgttcccggccgccacgctcgaggagagcttcgctgag 540
Query: 1407 cgtctcgtgttctctgttccacagagctccgtctccagcctcgccagctgcttccagcag 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgtctcgtgttctctgttccacagagctccgtctccagcctcgccagctgcttccagcag 600
Query: 1467 atagaggaggcgaaagaaaagctgaacatagtggagtacagtttcagtcagacgaccctg 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atagaggaggcgaaagaaaagctgaacatagtggagtacagtttcagtcagacgaccctg 660
Query: 1527 gagcaggttttcttgaaatttgcacaaacagagaacgt 1564
||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gagcaggttttcttgaaatttgcacaaacagagaacgt 698
>BF01018A2F12
Length = 711
Score = 674 bits (340), Expect = 0.0
Identities = 368/376 (97%), Gaps = 1/376 (0%)
Strand = Plus / Plus
Query: 1715 aaatatcgtatggagtataatcggaaataaataaaaaaaatcttcatcaccatataatat 1774
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaatatcgtatggagtataatcgaaaataaataaaaaaaatcttcatcaccatataatat 60
Query: 1775 cctagttatcggcatcatgtaatggaaaatacattgtagaatagagctaccacaggcggc 1834
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctagttattggcatcatgtaatggaaaatacattgtagaatagagctaccacaggcggc 120
Query: 1835 taccacaagtccgcatcctcacacttcatacgtatcgttaaagggttcccatttataatt 1894
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 taccacaagtccgcatcctcacacttcatacgtatcgttaaagggttcccgtttataatt 180
Query: 1895 ctccgaagactatacaattaacgtagtttgtagaatgtgaaacgctcaacgtcacgtgtg 1954
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 181 ctccgaagactatacaattaacgtagtttgtagaacgtgaaacgctcaacgtcacgtgcg 240
Query: 1955 tggtgtagcga-tggactcgttgttagctggatttcggtgtggaggtgtcggtgtgaaag 2013
||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 241 tggtgtagcgattggactcgttgttagctggatttcggcgtgtaggtgtcggtgtgaaag 300
Query: 2014 cgtcgagtctataaaatcagttagtagttttgtgcttttaagacgatgtaaaataaatac 2073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgtcgagtctataaaatcagttagtagttttgtgcttttaagacgatgtaaaataaatac 360
Query: 2074 gcttctgatatataat 2089
||||||||||||||||
Sbjct: 361 gcttctgatatataat 376
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 212,469
Number of extensions: 4431
Number of successful extensions: 4431
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4426
Number of HSP's successfully gapped: 2
Length of query: 2089
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2072
Effective length of database: 8,119,229
Effective search space: 16823042488
Effective search space used: 16823042488
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)