BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15664 (UTR included)
(3073 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B2E02 1556 0.0
>BF01056B2E02
Length = 824
Score = 1556 bits (785), Expect = 0.0
Identities = 817/827 (98%), Gaps = 3/827 (0%)
Strand = Plus / Plus
Query: 2137 tcaagattttccactactgcggcggccttaacttcgccagcaagaacctgttccgatcca 2196
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcaagattttccactactgtggcggccttaacttcgccagcaagaacctgttccgatcca 60
Query: 2197 cgctattccgaaaaatcggttacttcaaagatcacgatcagtctgacgaagacagcaaca 2256
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgctattccgaaaaatcggttatttcaaagatcacgatcagtctgacgaagacagcaaca 120
Query: 2257 tcaccaaaagtgacttcgagtgggagtcaaatgtaggagaaaaggtccgctgtgtgatca 2316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaccaaaagtgacttcgagtgggagtcaaatgtaggagaaaaggtccgctgtgtgatca 180
Query: 2317 tagacgccacagctctgtcgtacgtggatgctcctggcatccgcagcttggtggccgccc 2376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagacgccacagctctgtcgtacgtggatgctcctggcatccgcagcttggtggccgccc 240
Query: 2377 aacgcgagctggtctccagcaacatcaccgtcctactagcgggcgctaacggacctgtac 2436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacgcgagctggtctccagcaacatcaccgtcctactagcgggcgctaacggacctgtac 300
Query: 2437 tagagatgattgaaacgtacaattctcttgagtctgaccgcctgcaattggacacgttcc 2496
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 tagagatgattgaaacatacaattctcttgagtctgatcgcctgcaattggacacgttcc 360
Query: 2497 caactgtccacgacgcggtggtgtactacaagatgatagaagcgaagaaggatgcagcta 2556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caactgtccacgacgcggtggtgtactacaagatgatagaagcgaagaaggatgcagcta 420
Query: 2557 tcaccatcaccacttgatgggccagccaggaacccataacagcttattacgcggcttcga 2616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcaccatcaccacttgatgggccagccaggaacccataacagcttattacgcggcttcga 480
Query: 2617 cgtgaaccattcaagcgccgtgggtcacatcgagcttttatatttcagtgctatgaaaac 2676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgtgaaccattcaagcgccgtgggtcacatcgagcttttatatttcagtgctatgaaaac 540
Query: 2677 tatttatttttattgattttattacaatagcaataagaatgtacatcgcgtactccgaag 2736
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 541 tatttatttttattgattttattacaatagcaataagaatgtacatcgcgtactccgagg 600
Query: 2737 gtacttaattttggtgctaattataccgattgatgaccatgttcttaaagagtatataat 2796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtacttaattttggtgctaattataccgattgatgaccatgttcttaaagagtatataat 660
Query: 2797 tgaattatttagatttttttttgttgaaacttaaaattgtttgagtacttaatgaaatac 2856
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgaattattttgatttctttttgttgaaacttaaaattgtttgagtacttaatgaaatac 720
Query: 2857 tttacattttcaagtcggttcttttctgtacagtcaaataatgtgcttccaataatctac 2916
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 721 tttacattttcaagtcggttcttttctgtacagtca---aatgtgcttccaataatctac 777
Query: 2917 atacttggtggcgtaaattatgatttttctcaagatatgaactttgt 2963
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 atacttggtggcgtaaattatgatttttctcaagatatgaactttgt 824
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 330,328
Number of extensions: 5995
Number of successful extensions: 5995
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5992
Number of HSP's successfully gapped: 1
Length of query: 3073
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3055
Effective length of database: 8,109,745
Effective search space: 24775270975
Effective search space used: 24775270975
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)