BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15667 (UTR included)
(1819 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1217_C1 1645 0.0
>BF14_1217_C1
Length = 870
Score = 1645 bits (830), Expect = 0.0
Identities = 842/846 (99%)
Strand = Plus / Plus
Query: 500 aatggctccagctcagcccaaggcggtggctaaggctcccgctgccccagcaggcggtgt 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 aatggctccagctcagcccaaggcggtggctaaggctcccgctgccccagcaggcggtgt 63
Query: 560 tcagaaggccaaggttggcaaaccaaggaactatgatttgggaaatggaatcatgagatt 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tcagaaggccaaggttggcaaaccaaggaactatgatttgggaaatggaatcatgagatt 123
Query: 620 ctccaagaccaaaatgtttcacaagaaggccaagtacaagttcatcggcaagaagcaccc 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ctccaagaccaaaatgtttcacaagaaggccaagtacaagttcatcggcaagaagcaccc 183
Query: 680 taaagctgagaagcccaagaaactagcagtggttgttaagcctattggcggagacaagaa 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 taaagctgagaagcccaagaaactagcagtggttgttaagcctattggcggagacaagaa 243
Query: 740 tggaggcacccgtagggttctgatcaagaagaggaggtcattctaccctacccaggataa 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tggaggcacccgtagggttctgatcaagaagaggaggtcattctaccctacccaggataa 303
Query: 800 aatcaccacccgttcccaccacaagacatttagcaagcacgtgcgtcgcacacggccaaa 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aatcaccacccgttcccaccacaagacatttagcaagcacgtgcgtcgcacacggccaaa 363
Query: 860 tcttacgcctggcacagtgtgcattctgttggctggtagacacgccggcaaacgcgttgt 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tcttacgcctggcacagtgtgcattctgttggctggtagacacgccggcaaacgcgttgt 423
Query: 920 actgctgtcggtgatgcccagtggactcttgcttgtcactggaccttttgctttcaactc 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 actgctgtcggtgatgcccagtggactcttgcttgtcactggaccttttgctttcaactc 483
Query: 980 ctgcccgcttcgccgcattccgcagcgctatgtcatcggaactagcaccaaggtggactt 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctgcccgcttcgccgcattccgcagcgctatgtcatcggaactagcaccaaggtggactt 543
Query: 1040 aggtgatttcaagctccctgaacaccttgacgacgcttacttcaagaagaacaagaagag 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aggtgatttcaagctccctgaacaccttgacgacgcttacttcaagaagaacaagaagag 603
Query: 1100 cgtcaagcgcagtgttaagcgcaagcagggcgaggatatcttcgccaccaagaaagagaa 1159
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 cgtcaagcgcagtgtcaagcgcaagcagggcgaggatatcttcgccaccaagaaagagaa 663
Query: 1160 atatgctccatcagaacagcgcaaggttgaccagaaggcggttgacgaggctgtaatcaa 1219
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 664 atatgctccatcagaacagcgcaaggttgaccagaaggcggttgacgaggctgtgatcaa 723
Query: 1220 ggctatcggtgcacgtgcagacaagaagttgcttcgaggatacctcaagtcctcatttgg 1279
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ggctatcggtgcacgtgctgacaagaagttgcttcgaggatacctcaagtcctcatttgg 783
Query: 1280 actgcgttccagccagtaccctcaccggctacggttctagataataaacgatcttgacta 1339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 actgcgttccagccagtaccctcaccggctacggttctagataataaacgatcttgacta 843
Query: 1340 agaaaa 1345
| ||||
Sbjct: 844 aaaaaa 849
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 225,227
Number of extensions: 4655
Number of successful extensions: 4655
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4655
Number of HSP's successfully gapped: 1
Length of query: 1819
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1802
Effective length of database: 8,119,229
Effective search space: 14630850658
Effective search space used: 14630850658
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)