BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15668 (UTR included)
(2446 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027A1D08 1294 0.0
>BF01027A1D08
Length = 714
Score = 1294 bits (653), Expect = 0.0
Identities = 694/705 (98%), Gaps = 2/705 (0%)
Strand = Plus / Plus
Query: 1504 attacatctttgctcaactcgggatccaatacaaggtgaatcagctcaaggagctgatcc 1563
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 11 attacatctttgctcaactcgggatccaatacaaggtgaatcagctcaaagagctgatcc 70
Query: 1564 gccgcatcgacctacaactccacgaacatctacaaagacatggcgtcgattatctacaat 1623
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 71 gccgcatcgacctacaactccacgaacatctacaaagacatggcgtcgattacctacaat 130
Query: 1624 tttccttccgctggatgaacaatctactaacacgtgaaatacctcttccttgcaccattc 1683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tttccttccgctggatgaacaatctactaacacgtgaaatacctcttccttgcaccattc 190
Query: 1684 gactatgggacacatatttggctgaatcagatggattcgcgacatttcagctttatgtct 1743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gactatgggacacatatttggctgaatcagatggattcgcgacatttcagctttatgtct 250
Query: 1744 gcgccgcctttctgctacactggagggaacgactcatgttggaaaaagacttccaaggtc 1803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gcgccgcctttctgctacactggagggaacgactcatgttggaaaaagacttccaaggtc 310
Query: 1804 tcatgatcctattacaaaacgtcccgacccagaactggtcggattccaatataagtctac 1863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tcatgatcctattacaaaacgtcccgacccagaactggtcggattccaatataagtctac 370
Query: 1864 tggtagctgaagcctacaggctcaagttcgcgttcgctgacgcacccaaccatttgcaca 1923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tggtagctgaagcctacaggctcaagttcgcgttcgctgacgcacccaaccatttgcaca 430
Query: 1924 atgccgggaaatccgatagatgacctggattgaaaaatttttacttatgaagtgcaaggc 1983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 atgccgggaaatccgatagatgacctggattgaaaaatttttacttatgaagtgcaaggc 490
Query: 1984 tcaggacatgtcatgcacaacgactaattttttattaaaatatcaccaattccatgtacc 2043
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 491 tcaggacatgtcatgcacaacgactaa-tttttattaaaatatcaccaattccatgtacc 549
Query: 2044 tatgtgtttatcaaatgccaaaaaaatattaattgttttgtgtctcatttctgctccata 2103
|||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||
Sbjct: 550 tatgtgtttatcaaatgccaaaaaaatattaaatgttttgtgtgtcatttctgttccata 609
Query: 2104 aaa-aaaaatatatataaaatttatatttgtccgaattgtgcctgttcctagactttcgg 2162
||| | | ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aaatatatatatatatataatttatatttgtccgaattgtgcctgttcctagactttcgg 669
Query: 2163 tatataaaaaagttcatataaacggaaggttcagtggtataaaca 2207
|||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 670 tatataaaaaagtttatataaacggaaggttcagtggtataaaca 714
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 311,119
Number of extensions: 7048
Number of successful extensions: 7048
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7045
Number of HSP's successfully gapped: 1
Length of query: 2446
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2429
Effective length of database: 8,119,229
Effective search space: 19721607241
Effective search space used: 19721607241
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)