BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15683 (UTR included)
(1750 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_558_C1 1693 0.0
>BF14_558_C1
Length = 1364
Score = 1693 bits (854), Expect = 0.0
Identities = 860/862 (99%)
Strand = Plus / Plus
Query: 390 gtaattttcagtaaacgctgacggcccacttttaaaatattcaaataaattctgttaaag 449
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtaattttcattaaacgctgacggcccacttttaaaatattcaaataaattctgttaaag 60
Query: 450 tgttattacctactataactttaatttcattctttttaaaatctcccaaatatgtccgga 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttattacctactataactttaatttcattctttttaaaatctcccaaatatgtccgga 120
Query: 510 ggtagcggcggtagcaggaatgaatgtagaatatacgttggtaatctgcctcctgatatt 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtagcggcggtagcaggaatgaatgtagaatatacgttggtaatctgcctcctgatatt 180
Query: 570 aggacaaaggacatccaagaccttttttacaaatttggtaaagtcacgttcgttgatttg 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggacaaaggacatccaagaccttttttacaaatttggtaaagtcacgttcgttgatttg 240
Query: 630 aagaacagaaaaggaccaccgtttgcattcgtcgaatttgaagatcctcgtgatgcagat 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagaacagaaaaggaccaccgtttgcattcgtcgaatttgaagatcctcgtgatgcagat 300
Query: 690 gatgcagttcgagcccgcgatggctatgactacgatggatataggctacgtgtagagttc 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatgcagttcgagcccgcgatggctatgactacgatggatataggctacgtgtagagttc 360
Query: 750 cctcgtggaggcggcggtggtgcgcgcggaggacgctcgcagcctgatcgctttgggccg 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cctcgtggaggcggcggtggtgcgcgcggaggacgctcgcagcctgatcgctttgggccg 420
Query: 810 cgtccagcagcacgaggcccgcccgcacgtcgctccgagtatagagtgctcgtcacagga 869
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 421 cgtccagcagcacgaggcccgcccgcacgtcgctccgaatatagagtgctcgtcacagga 480
Query: 870 ctgccgccatcgggctcctggcaggatctgaaggaccatatgcgcgaagcgggagacgtg 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgccgccatcgggctcctggcaggatctgaaggaccatatgcgcgaagcgggagacgtg 540
Query: 930 tgcttcgcggacactttcaaggatggcactggtgtggtggaattcctacgacacgaggac 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgcttcgcggacactttcaaggatggcactggtgtggtggaattcctacgacacgaggac 600
Query: 990 atgaagtacgccgtcaagaagctggacgactcgcgctttagaagccacgagggagaggtg 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atgaagtacgccgtcaagaagctggacgactcgcgctttagaagccacgagggagaggtg 660
Query: 1050 tcttacatccgggttaaggaagactatggcagcggcggcggcggcgggctcagggacaga 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcttacatccgggttaaggaagactatggcagcggcggcggcggcgggctcagggacaga 720
Query: 1110 tctcctgagtatcaggccgggtcaccttcgtacacccgtcggggctccccatcatactct 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tctcctgagtatcaggccgggtcaccttcgtacacccgtcggggctccccatcatactct 780
Query: 1170 ccggtgcgtcgctcgtactcgcgctcacgttcccgctctcgttcccgctcgcctgtaacc 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ccggtgcgtcgctcgtactcgcgctcacgttcccgctctcgttcccgctcgcctgtaacc 840
Query: 1230 acccgcccacgaaactactgag 1251
||||||||||||||||||||||
Sbjct: 841 acccgcccacgaaactactgag 862
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 301,782
Number of extensions: 8178
Number of successful extensions: 8178
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8174
Number of HSP's successfully gapped: 1
Length of query: 1750
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1733
Effective length of database: 8,119,229
Effective search space: 14070623857
Effective search space used: 14070623857
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)