BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15686 (UTR included)
(1429 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 230 5e-60
BF01060B1D11 184 3e-46
BF01016B1E06 92 3e-18
BF14_335_C4 90 1e-17
BF01043B1E03 70 1e-11
BF01019A1H08 68 4e-11
BF14_335_C5 68 4e-11
>BF01047B2H03
Length = 758
Score = 230 bits (116), Expect = 5e-60
Identities = 261/309 (84%), Gaps = 9/309 (2%)
Strand = Plus / Minus
Query: 109 gatgagtctaaaaaggccatcggagctctttaaacacctaagagtttccaagagatatat 168
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||
Sbjct: 758 gatgagtctaaaaaggccatcggagctctataaacacttaagagtttccaagagacatat 699
Query: 169 cccggggcaattctatgatgaagtcgttacattgctcccaaaagacaaagatgcccc--- 225
||||||| || | || |||| ||| |||||| ||| ||||| | | |||||||||
Sbjct: 698 cccggggaaagcccataatgatgtcattacatcactctcaaaaaatagagatgcccctga 639
Query: 226 -----agtcacgacttcaattccataagcagtttataataggagcacaaattaac-agtg 279
||||| |||||||||||||||| |||||||| ||||||||||||| |||| || |
Sbjct: 638 actaaagtcaagacttcaattccataaacagtttatgataggagcacaaagtaacgagag 579
Query: 280 aaggggtaggatcaagtaagaaagcccaagatacgaatatattgaagtcttttattcggc 339
||| |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 578 taggattaggatcaaggaagaaggcccaagatacggatatattgaagtcttttattcggc 519
Query: 340 gagacgagatatataaatataagattcatgcaattagtttagagatgcagaaagagtagt 399
|||||||| || |||||| || |||||||| |||||||| |||||||| |||| ||
Sbjct: 518 aagacgagaatgatggatataacatccatgcaatgagtttagatatgcagaacgagtggt 459
Query: 400 tagacatag 408
|||||||||
Sbjct: 458 tagacatag 450
Score = 147 bits (74), Expect = 6e-35
Identities = 255/314 (81%), Gaps = 1/314 (0%)
Strand = Plus / Minus
Query: 554 aacttgctatatctgtgggaaggcagttggaactgctaagcatttgctggtgggatgtaa 613
||||||||||||||| | | |||||||||||| |||| ||||||||||| |||||||||
Sbjct: 365 aacttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtag 306
Query: 614 ggtactcctggttagcattcaatactcgcg-tcgtcacgatagggttctggaaatcatac 672
| ||||||||| |||| |||||||| || || || ||||||||| | | ||||||
Sbjct: 305 gctactcctggatagcggtcaatactaccggtctccatgatagggttttaaatttcatac 246
Query: 673 gtgaaacgtttagtctttcggtagccagagcgcaaagggaaataaccaagaacaagctat 732
|||| || ||||| ||| ||||| || ||| ||| |||||||||| ||| || ||
Sbjct: 245 atgaagcggttagtattttggtagtcattgcggaaaaagaaataaccacaaacgggcgat 186
Query: 733 cagtaggttttgtgagagagggcactaaggctataaaatcaaaagtcaagccttactcca 792
| | |||||||||||||| | || || ||||||||| ||||| ||||||||||||| |
Sbjct: 185 taattggttttgtgagagaagacattagggctataaagtcaaacatcaagccttactcta 126
Query: 793 tccttaaagcagctacggattggactataatgatggatacgtatgaaaaacaatacaaaa 852
|||||||||| | | ||||||| |||||||| ||||||||||||| ||| ||||||||
Sbjct: 125 tccttaaagcggtttcggattgcactataatcatggatacgtatggggaacgatacaaaa 66
Query: 853 tccccgaggatatt 866
|||||||| |||||
Sbjct: 65 tccccgagcatatt 52
>BF01060B1D11
Length = 799
Score = 184 bits (93), Expect = 3e-46
Identities = 272/330 (82%), Gaps = 10/330 (3%)
Strand = Plus / Minus
Query: 89 agggatcggaaatgttttgggatgagtctaaaaaggccatcggagctctttaaacaccta 148
|||||||| || |||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 607 agggatcgcaatagttttgggatgagtctaaaaaggccatcggagctctataaacactta 548
Query: 149 agagtttccaagagatatatcccggggcaattctatgatgaagtcgttacattgctccca 208
||||||||||||||| ||||||||||| || | || |||| ||| |||||| ||||||
Sbjct: 547 agagtttccaagagacatatcccggggaaagcccataatgatgtcattacatcactccca 488
Query: 209 aaagacaaagatgccccag--------tcac-gacttcaattccataagcagtttataat 259
||| | ||||| ||||| || ||||||||||||| || |||||||| ||
Sbjct: 487 aaaaccggagatggcccagaactaaagtctgagacttcaattccacaaacagtttatgat 428
Query: 260 aggagcacaaattaac-agtgaaggggtaggatcaagtaagaaagcccaagatacgaata 318
||||||||||| |||| || | ||| |||||||||| ||||| || ||||||| | |||
Sbjct: 427 aggagcacaaagtaacgagagtaggattaggatcaaggaagaaggctcaagatatggata 368
Query: 319 tattgaagtcttttattcggcgagacgagatatataaatataagattcatgcaattagtt 378
||||||||| |||||||| || |||||||| || ||||||||| |||||||| |||
Sbjct: 367 tattgaagtattttattcagcaagacgagaatgatggatataagatccatgcaatgcgtt 308
Query: 379 tagagatgcagaaagagtagttagacatag 408
||||||||||||| |||| |||||||||||
Sbjct: 307 tagagatgcagaacgagtggttagacatag 278
Score = 95.6 bits (48), Expect = 2e-19
Identities = 94/109 (86%), Gaps = 4/109 (3%)
Strand = Plus / Minus
Query: 508 tccctgatcagagtaattttgtaaga----tggggtaaaggtattgaaaaaacttgctat 563
|||| |||||||||||||| |||||| ||||||||| || |||||||||||||||
Sbjct: 234 tcccagatcagagtaatttagtaagacgggaggggtaaagataccgaaaaaacttgctat 175
Query: 564 atctgtgggaaggcagttggaactgctaagcatttgctggtgggatgta 612
|| || | |||||||||||||| |||||||||||||||| |||||||||
Sbjct: 174 atttgcgagaaggcagttggaattgctaagcatttgctgatgggatgta 126
>BF01016B1E06
Length = 606
Score = 91.7 bits (46), Expect = 3e-18
Identities = 111/129 (86%), Gaps = 4/129 (3%)
Strand = Plus / Minus
Query: 887 aatttggttaggtagagagaggaatttggacgttggaggttagcgtttaacgcgcgttag 946
||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||
Sbjct: 318 aatttggttaggtagagagaggagattggacggtggaggtgagcgtttaa--cgcgttag 261
Query: 947 atatcagcccctttaacctacacctgagtcgc-aatctcaggcactgttggagctccttg 1005
||| ||||||| |||||||||||| ||||| | || | |||||||||| |||||||
Sbjct: 260 ata-gggccccttaaacctacacctgggtcgctactccccggcactgttgaagctcctct 202
Query: 1006 ctctgcaac 1014
|||||||||
Sbjct: 201 ctctgcaac 193
>BF14_335_C4
Length = 1491
Score = 89.7 bits (45), Expect = 1e-17
Identities = 100/117 (85%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 888 atttggttaggtagagagaggaatttggacgttggaggttagcgtttaacgcgcgttaga 947
|||||||||||||||||||||| ||||| | ||||| ||||||||| |||||| |||
Sbjct: 1182 atttggttaggtagagagaggagcttggaaagttgaggtgagcgtttaatgcgcgtaaga 1241
Query: 948 tatcagcccctttaacctacacctgagtcgcaa-tctcaggcactgttggagctcct 1003
|| ||||||| |||||||||||| ||||||| || |||||||||||| |||||||
Sbjct: 1242 taaaggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcct 1298
>BF01043B1E03
Length = 830
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 887 aatttggttaggtagagagaggaatttggacgttggaggttagcgtttaacgcgcgttag 946
||||||||||||||||||||||| |||||| ||||||| ||| ||||||||||||||
Sbjct: 325 aatttggttaggtagagagaggaccttggacagtggaggtgagcacttaacgcgcgttag 384
Query: 947 ata 949
|||
Sbjct: 385 ata 387
>BF01019A1H08
Length = 504
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 931 gtttaacgcgcgttagatatcagcccctttaacctacacctgagtcgcaa-tctcaggca 989
|||||||||| ||||||| |||||||| |||||||||||| ||||||| || ||||||
Sbjct: 504 gtttaacgcgtcttagataggagccccttaaacctacacctgggtcgcaactcccaggca 445
Query: 990 ctgttggagctcct 1003
|||||| |||||||
Sbjct: 444 ctgttgaagctcct 431
>BF14_335_C5
Length = 1597
Score = 67.9 bits (34), Expect = 4e-11
Identities = 90/109 (82%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 896 aggtagagagaggaatttggacgttggaggttagcgtttaacgcgcgttagatatcagcc 955
|||||||||||||| ||||||| ||||||| ||||||||| |||||||||| | ||
Sbjct: 1438 aggtagagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcg 1497
Query: 956 cctttaacctacacctgagtcgcaa-tctcaggcactgttggagctcct 1003
|||| ||||||||| |||||| || |||||||||||| |||||||
Sbjct: 1498 ccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcct 1546
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 150,228
Number of extensions: 2749
Number of successful extensions: 2749
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 2740
Number of HSP's successfully gapped: 12
Length of query: 1429
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1412
Effective length of database: 8,119,229
Effective search space: 11464351348
Effective search space used: 11464351348
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)