BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15694 (UTR included)
(3214 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B1H04 1015 0.0
BF01046A1H10 468 e-131
>BF01016B1H04
Length = 624
Score = 1015 bits (512), Expect = 0.0
Identities = 531/535 (99%), Gaps = 3/535 (0%)
Strand = Plus / Plus
Query: 2494 agtcatgtggcacagatctcatacagctagacgattcaccgaccggcctcgaccatttcg 2553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 agtcatgtggcacagatctcatacagctagacgattcaccgaccggcctcgaccatttcg 152
Query: 2554 atcctctcaagtatcgggataaagaggacaaacagactatcaaaagttccgcggacagtg 2613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 atcctctcaagtatcgggataaagaggacaaacagactatcaaaagttccgcggacagtg 212
Query: 2614 cgctcctgcatgagtacggattggacttcggtcagttcggtctctctgagctgtctgctc 2673
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 213 cgctcctgcatgagtacggattggacttcggccagttcggtctctctgagctgtctgctc 272
Query: 2674 cccaagccagcacacacgagggatggacgaccttcaactgagagctcaatatacgctggt 2733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cccaagccagcacacacgagggatggacgaccttcaactgagagctcaatatacgctggt 332
Query: 2734 ttagcacaaacgtctcaagccttttgtctcctgaatgtaaacacgtcgctaatttcgtat 2793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ttagcacaaacgtctcaagccttttgtctcctgaatgtaaacacgtcgctaatttcgtat 392
Query: 2794 atttattgtgaaagctgattgggctgtgactgtcgttggcgcataaatatgtaaaatagt 2853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 atttattgtgaaagctgattgggctgtgactgtcgttggcgcataaatatgtaaaatagt 452
Query: 2854 aaaacgcgaaacgagttatgttatttattttgcgaggtttcctttagtttttttttttaa 2913
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 453 aaaacgcgaaacgagttatgttatttattttgcgaggtttcctttag-ttttttttttaa 511
Query: 2914 ttcttttttttttgtattgtacataatgttacatatcaaattgtatatttcgcaaaggaa 2973
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ttc--ttttttttgtattgtacataatgttacatatcaaattgtatatttcgcaaaggaa 569
Query: 2974 aaaaatatatgtatattaatgtaagtatgttgtatgttcagtcggatacttggcg 3028
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 aaaaatatatgtatattaatgtaagtatgttgtatgttcagtcggatacttggcg 624
>BF01046A1H10
Length = 837
Score = 468 bits (236), Expect = e-131
Identities = 236/236 (100%)
Strand = Plus / Plus
Query: 2260 gcgctattcccgtatcaaactttacaacgaatataactaagcacgaggtcccaacagagt 2319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gcgctattcccgtatcaaactttacaacgaatataactaagcacgaggtcccaacagagt 150
Query: 2320 ttcacactagcgccatccgattcacggaggataatgataaggcaaaactcaaactgactc 2379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 ttcacactagcgccatccgattcacggaggataatgataaggcaaaactcaaactgactc 210
Query: 2380 tatcagcacatgcgcggtcgctccccgcacccgctccgccgcccgtgcccgcacccgtgc 2439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tatcagcacatgcgcggtcgctccccgcacccgctccgccgcccgtgcccgcacccgtgc 270
Query: 2440 ccgcgccctctcgcaccgagcaccgacctcgaccctccaagagccggacccaagag 2495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ccgcgccctctcgcaccgagcaccgacctcgaccctccaagagccggacccaagag 326
Score = 172 bits (87), Expect = 2e-42
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 939 cgtggagccttcacttgccgctgtcctggaagcggattgcccagcatccctgacaactgc 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 cgtggagccttcacttgccgctgtcctggaagcggattgcccagcatccctgacaactgc 69
Query: 999 aatctgacggagtacttcagtgcgcta 1025
|||||||||||||||||||||||||||
Sbjct: 70 aatctgacggagtacttcagtgcgcta 96
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 379,106
Number of extensions: 12468
Number of successful extensions: 12468
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 12466
Number of HSP's successfully gapped: 3
Length of query: 3214
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3196
Effective length of database: 8,109,745
Effective search space: 25918745020
Effective search space used: 25918745020
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)