BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15699 (UTR included)
(2710 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043B2H11 1009 0.0
BF01060B1D11 206 1e-52
BF01047B2H03 194 5e-49
>BF01043B2H11
Length = 764
Score = 1009 bits (509), Expect = 0.0
Identities = 518/521 (99%)
Strand = Plus / Plus
Query: 2190 gaagtccccaaagatatatagtaatcatatattacgagtatgtgttgcaccaccaaaggt 2249
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 gaagtccccaaagatatatagtaatcatatattatgagtatgtgttgcaccaccaaaggt 60
Query: 2250 accaaaaaaactattatttttcctatttagacgtaaaaaccactcattttaatatttgtg 2309
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accaaaaaaacgattatttttcctatttagacgtaaaaaccactcattttaatatttgtg 120
Query: 2310 tttatgcatgccatgacaatttatttacaaaaggtcgtaagtgataaataaattaagact 2369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttatgcatgccatgacaatttatttacaaaaggtcgtaagtgataaataaattaagact 180
Query: 2370 aatgttacagaaacgatttcatcacaggagcaatgctaaatcacattttaacatgaattc 2429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatgttacagaaacgatttcatcacaggagcaatgctaaatcacattttaacatgaattc 240
Query: 2430 ataaataaaaatgttaacgtataagccgaattttccatattattattttaccacactatc 2489
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 241 ataaataaaaatgttaacgtataagccgaattttctatattattattttaccacactatc 300
Query: 2490 tttgtataacacccaaaactctgcaagcaagggttacactatcaatgtgatctctggaca 2549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttgtataacacccaaaactctgcaagcaagggttacactatcaatgtgatctctggaca 360
Query: 2550 tctctatcaagtcctttagtactaaaattagaataggctagaaggaatacaagagttaaa 2609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctctatcaagtcctttagtactaaaattagaataggctagaaggaatacaagagttaaa 420
Query: 2610 gataacgctagttaacattcgcatcggctacttctttatttttaaatgtttttaatggcc 2669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gataacgctagttaacattcgcatcggctacttctttatttttaaatgtttttaatggcc 480
Query: 2670 ttaccttgttattaaagcttttcctgataatgaaaccaagc 2710
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttaccttgttattaaagcttttcctgataatgaaaccaagc 521
>BF01060B1D11
Length = 799
Score = 206 bits (104), Expect = 1e-52
Identities = 211/244 (86%), Gaps = 2/244 (0%)
Strand = Plus / Minus
Query: 1565 ggctttattcagggatcgcaatagttttgggatgagactaaaaaggccatcggagctcta 1624
||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 617 ggctttaattagggatcgcaatagttttgggatgagtctaaaaaggccatcggagctcta 558
Query: 1625 caaacacctaagagtttccaagagatatatcccgggaaaatcccatgatgacgtcgttac 1684
|||||| ||||||||||||||||| |||||||||| ||| ||||| |||| ||| ||||
Sbjct: 557 taaacacttaagagtttccaagagacatatcccggggaaagcccataatgatgtcattac 498
Query: 1685 atcgctcccaaaagacaaagatgccccagagctagagt-taaggcttcaattccataagc 1743
||| ||||||||| | ||||| |||||| ||| ||| | || ||||||||||| || |
Sbjct: 497 atcactcccaaaaaccggagatggcccagaactaaagtctgagacttcaattccacaaac 438
Query: 1744 agttaatgataggcgcacaaagtaac-acagtgcggttaggatcaagtaagaaggcccaa 1802
|||| |||||||| |||||||||||| | ||| | ||||||||||| |||||||| |||
Sbjct: 437 agtttatgataggagcacaaagtaacgagagtaggattaggatcaaggaagaaggctcaa 378
Query: 1803 gata 1806
||||
Sbjct: 377 gata 374
>BF01047B2H03
Length = 758
Score = 194 bits (98), Expect = 5e-49
Identities = 186/214 (86%), Gaps = 1/214 (0%)
Strand = Plus / Minus
Query: 1595 gatgagactaaaaaggccatcggagctctacaaacacctaagagtttccaagagatatat 1654
|||||| ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||
Sbjct: 758 gatgagtctaaaaaggccatcggagctctataaacacttaagagtttccaagagacatat 699
Query: 1655 cccgggaaaatcccatgatgacgtcgttacatcgctcccaaaagacaaagatgccccaga 1714
|||||| ||| ||||| |||| ||| ||||||| ||| ||||| | | ||||||||| ||
Sbjct: 698 cccggggaaagcccataatgatgtcattacatcactctcaaaaaatagagatgcccctga 639
Query: 1715 gctagagttaaggcttcaattccataagcagttaatgataggcgcacaaagtaac-acag 1773
||| ||| ||| |||||||||||||| ||||| |||||||| |||||||||||| | ||
Sbjct: 638 actaaagtcaagacttcaattccataaacagtttatgataggagcacaaagtaacgagag 579
Query: 1774 tgcggttaggatcaagtaagaaggcccaagatac 1807
| | ||||||||||| |||||||||||||||||
Sbjct: 578 taggattaggatcaaggaagaaggcccaagatac 545
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 259,741
Number of extensions: 4642
Number of successful extensions: 4642
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4639
Number of HSP's successfully gapped: 3
Length of query: 2710
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2693
Effective length of database: 8,119,229
Effective search space: 21865083697
Effective search space used: 21865083697
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)