BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15712 (UTR included)
(1753 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009A1G03 1350 0.0
BF01051A2C09 946 0.0
>BF01009A1G03
Length = 785
Score = 1350 bits (681), Expect = 0.0
Identities = 690/693 (99%)
Strand = Plus / Plus
Query: 482 ttttaaatacgtctacaacatgagacggcgggcaggagttggtgctattcaaaaacagag 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ttttaaatacgtctacaacatgagacggcgggcaggagttggtgctattcaaaaacagag 152
Query: 542 acttgagcaggagaagtatagagaaaaaggttccgaaatccaggagaaccaattccagca 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 acttgagcaggagaagtatagagaaaaaggttccgaaatccaggagaaccaattccagca 212
Query: 602 gatgtctaagcaattagatgtattcagagaaaacttggaagaattcgcctctaaacacaa 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gatgtctaagcaattagatgtattcagagaaaacttggaagaattcgcctctaaacacaa 272
Query: 662 aaacgaaataaaaaagaacgctcagttcaggcgtcaatttcaggaaatgtgtgctgcaat 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aaacgaaataaaaaagaacgctcagttcaggcgtcaatttcaggaaatgtgtgctgcaat 332
Query: 722 cggtgttgacccattggcttctgggaaaggattctggtcagttttaggcattggtgattt 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cggtgttgacccattggcttctgggaaaggattctggtcagttttaggcattggtgattt 392
Query: 782 ttactatgagcttggtgtacaaatagttgaggtatgtctcgctacgaattacaaaaatgg 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ttactatgagcttggtgtacaaatagttgaggtatgtctcgctacgaattacaaaaatgg 452
Query: 842 tggtcttataacattggatgaattaagaagtagattgatagccgctagaggcagagcgaa 901
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 453 tggtcttataacattggatgaattaagaagtagattaatagccgctagaggcagagcgaa 512
Query: 902 gaaacatcaggatattactaatgaagatcttcttgcagctgttaaaaaacttaagatttt 961
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 513 gaaacatcaggatattactaatgaagatcttctcgcagctgttaaaaagcttaagatttt 572
Query: 962 tggcaatggtttcacagttgtatcgataggtaaagggaaatggttggtacagtcaatacc 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tggcaatggtttcacagttgtatcgataggtaaagggaaatggttggtacagtcaatacc 632
Query: 1022 gggtgaactgaatttggatcaaacattggtgcttcaaaaggctagtggtctcggtaaagc 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gggtgaactgaatttggatcaaacattggtgcttcaaaaggctagtggtctcggtaaagc 692
Query: 1082 ttggatttccaaatctgtactcatcaatgatctgggttggaatgaaacgagagctcagaa 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 ttggatttccaaatctgtactcatcaatgatctgggttggaatgaaacgagagctcagaa 752
Query: 1142 tgctttgaatcatatggttaaggaaggtctggc 1174
|||||||||||||||||||||||||||||||||
Sbjct: 753 tgctttgaatcatatggttaaggaaggtctggc 785
Score = 107 bits (54), Expect = 6e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 422 tgcaaatacctaatgggtatgtggttcagtgacaatattttgaaaacgaaactatttagt 481
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 tgcaaatacctaatgggtatgtggttcagtgannntattttgaaaacgaaactatttagt 60
Query: 482 ttt 484
|||
Sbjct: 61 ttt 63
>BF01051A2C09
Length = 807
Score = 946 bits (477), Expect = 0.0
Identities = 486/489 (99%)
Strand = Plus / Plus
Query: 482 ttttaaatacgtctacaacatgagacggcgggcaggagttggtgctattcaaaaacagag 541
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ttttaaatacgtgtacaacatgagacggcgggcaggagttggtgctattcaaaaacagag 263
Query: 542 acttgagcaggagaagtatagagaaaaaggttccgaaatccaggagaaccaattccagca 601
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 264 acttgagcaggagaagtatagagaaaaaggttccgaaatacaggagaaccaattccagca 323
Query: 602 gatgtctaagcaattagatgtattcagagaaaacttggaagaattcgcctctaaacacaa 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gatgtctaagcaattagatgtattcagagaaaacttggaagaattcgcctctaaacacaa 383
Query: 662 aaacgaaataaaaaagaacgctcagttcaggcgtcaatttcaggaaatgtgtgctgcaat 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaacgaaataaaaaagaacgctcagttcaggcgtcaatttcaggaaatgtgtgctgcaat 443
Query: 722 cggtgttgacccattggcttctgggaaaggattctggtcagttttaggcattggtgattt 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cggtgttgacccattggcttctgggaaaggattctggtcagttttaggcattggtgattt 503
Query: 782 ttactatgagcttggtgtacaaatagttgaggtatgtctcgctacgaattacaaaaatgg 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttactatgagcttggtgtacaaatagttgaggtatgtctcgctacgaattacaaaaatgg 563
Query: 842 tggtcttataacattggatgaattaagaagtagattgatagccgctagaggcagagcgaa 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tggtcttataacattggatgaattaagaagtagattgatagccgctagaggcagagcgaa 623
Query: 902 gaaacatcaggatattactaatgaagatcttcttgcagctgttaaaaaacttaagatttt 961
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 624 gaaacatcaggatattactaatgaagatcttctcgcagctgttaaaaaacttaagatttt 683
Query: 962 tggcaatgg 970
|||||||||
Sbjct: 684 tggcaatgg 692
Score = 317 bits (160), Expect = 3e-86
Identities = 163/164 (99%)
Strand = Plus / Plus
Query: 321 aaatttttataaactatttctttgaaaatctttatacaaacgtcaattgtcaagtgtcat 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 aaatttttataaactatttctttgaaaatctttatacaaacgtcaattgtcaagtgtcat 70
Query: 381 tttcacaaaatctgttttatatgaaaacataatcaaaaatttgcaaatacctaatgggta 440
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tttcacaaaatctgttttgtatgaaaacataatcaaaaatttgcaaatacctaatgggta 130
Query: 441 tgtggttcagtgacaatattttgaaaacgaaactatttagtttt 484
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tgtggttcagtgacaatattttgaaaacgaaactatttagtttt 174
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 272,208
Number of extensions: 6173
Number of successful extensions: 6173
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6173
Number of HSP's successfully gapped: 4
Length of query: 1753
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1736
Effective length of database: 8,119,229
Effective search space: 14094981544
Effective search space used: 14094981544
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)