BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15720 (UTR included)
(2818 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01003X1G11 1402 0.0
BF01018B1C02 1386 0.0
>BF01003X1G11
Length = 807
Score = 1402 bits (707), Expect = 0.0
Identities = 732/741 (98%)
Strand = Plus / Plus
Query: 1634 ggcgggctacctgaatgtgccgcggataaagggaacacataacgctatgaagagtggtat 1693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 ggcgggctacctgaatgtgccgcggataaagggaacacataacgctatgaagagtggtat 108
Query: 1694 gttagcagccgaggcagccgtggacctcattgtatcaggagaagcatctcacgataaagg 1753
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 109 gttagcagccgaggcagccgtggacctcattgtatcaggagaagcatctcacgagaaagg 168
Query: 1754 agttgtgccaactatgtatgaagacaaattaaaacaatcatatgtatataaagagttaaa 1813
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 169 agttgtgccaactatgtatgaagacaaattaaaacaatcatatgtatataaagaattaaa 228
Query: 1814 gcaagttagaaactgtcggccatctttccacagtcccctgggtgtgtttggaggcgtggc 1873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gcaagttagaaactgtcggccatctttccacagtcccctgggtgtgtttggaggcgtggc 288
Query: 1874 ctattctggtttttcaacattggtccgtggaaaggaaccttggacattcagccatggagg 1933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ctattctggtttttcaacattggtccgtggaaaggaaccttggacattcagccatggagg 348
Query: 1934 tgcggatcacagtaaattaaagccggcgaaagatttcaaacccattgactatcctaagcc 1993
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 349 tgcggatcacagtaaattaaagccggcgaaagatttcaaacccatcgactatcctaagcc 408
Query: 1994 ggatggtgttgtgacctttgaccttttatcctcagtcgcactcacaggcaccaatcacga 2053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggatggtgttgtgacctttgaccttttatcctcagtcgcactcacaggcaccaatcacga 468
Query: 2054 gtcagaccagccgcctcaccttaccttgaaggatgactccatccctgtcaagaggaacct 2113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gtcagaccagccgcctcaccttaccttgaaggatgactccatccctgtcaagaggaacct 528
Query: 2114 cgcacagttcgacggaccggaggcgagattctgtcccgcgggtgtgtatgagtttgttcc 2173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 cgcacagttcgacggaccggaggcgagattctgtcccgcgggtgtgtatgagtttgttcc 588
Query: 2174 catggaaaccggagacggccaaaggcttcagatcaacgcacagaattgtatacattgtaa 2233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 catggaaaccggagacggccaaaggcttcagatcaacgcacagaattgtatacattgtaa 648
Query: 2234 gacatgtgatatcaaagatccttcgcagaacatcaactgggttgtgcctgagagtggtgg 2293
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 649 gacatgtgatatcaaagatccttcgcagaacatcaactgggttgtgcctgnnagtggcgg 708
Query: 2294 ggggccggcttacaatggaatgtaatatatgagaagtactaccgcacacatacaaacaca 2353
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 709 ggggccggcttacaatggaatgtaatatatgagaagtactaccgcagacatacaaacaca 768
Query: 2354 catacaatacaacaaataata 2374
||||||||||||||| ||||
Sbjct: 769 tatacaatacaacaaacaata 789
>BF01018B1C02
Length = 723
Score = 1386 bits (699), Expect = 0.0
Identities = 717/723 (99%)
Strand = Plus / Plus
Query: 474 gaactctgaacttttgttttgttaaaaatggcgacggcaattgtttgttcggctcgcaag 533
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 gaactctgatcttttgttttgttaaaaatggcgacggcaattgtttgttcgtctcgcaag 60
Query: 534 gtcgggaggctgacaaatgctgttcgacgtctatactcggattatcctaaaatcacaacc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcgggaggctgacaaatgctgttcgacgtctatactcggattatcctaaaatcacaacc 120
Query: 594 cactatacaattcatcctcgagaaaatgattccagatggaaagatgtaagcatggaacgt 653
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 cactatacaattcatcctcgagaaaatgattccagatggaaagatataagcatggaacgt 180
Query: 654 catgccgaggagacagatatcctcattattggtggtggtccagctggtatggcagctgca 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catgccgaggagacagatatcctcattattggtggtggtccagctggtatggcagctgca 240
Query: 714 atcagggctcggcaactggctgaggaaaaaggggctgaagtcagagtgacccttttagaa 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcagggctcggcaactggctgaggaaaaaggggctgaagtcagagtgacccttttagaa 300
Query: 774 aaggcagctgaggccggcggtcatatactttccggggcatgtgtggatcccaaagccctt 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaggcagctgaggccggcggtcatatactttccggggcatgtgtggatcccaaagccctt 360
Query: 834 aatgagttaatacctgattggaaagataaaggagctccattgaacacacctgtcacatca 893
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 361 aatgagttaatacctgattggaaagataaaggagctccaatgaacacacctgtcacatca 420
Query: 894 gacaagtttggttacttaactaagagtggcagaatacctttgcctgttttccccggttta 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacaagtttggttacttaactaagagtggcagaatacctttgcctgttttccccggttta 480
Query: 954 ccgcattataaccatggtaactatgtggtgagattgggtcatttagtgcgatggatgtca 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccgcattataaccatggtaactatgtggtgagattgggtcatttagtgcgatggatgtca 540
Query: 1014 gagcaggcggaggcacttggcgcagaggtttggccaggcaccgctggtgctgagttgctg 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gagcaggcggaggcacttggcgcagaggtttggccaggcaccgctggtgctgagttgctg 600
Query: 1074 tatcgtgacgacggttccttgaaaggtgtagccacaggggatgttggaatcgccaaagac 1133
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 601 tatcgtgacgacggttccttgaaaggtgtagccacaggggatgttggcatcgccaaggac 660
Query: 1134 ggcagccctaaagacatgtttgagcgtggcatggaattccactcaaagataacaatattc 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggcagccctaaagacatgtttgagcgtggcatggaattccactcaaagataacaatattc 720
Query: 1194 gct 1196
|||
Sbjct: 721 gct 723
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 334,377
Number of extensions: 7452
Number of successful extensions: 7452
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7452
Number of HSP's successfully gapped: 2
Length of query: 2818
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2801
Effective length of database: 8,119,229
Effective search space: 22741960429
Effective search space used: 22741960429
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)