BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15736 (UTR included)
(5398 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B1B03 1447 0.0
>BF01060B1B03
Length = 754
Score = 1447 bits (730), Expect = 0.0
Identities = 748/754 (99%)
Strand = Plus / Plus
Query: 3754 aggttgaagtgaagagtaaaatacaacccatcaagattttggacagcaaacgttcgcaga 3813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggttgaagtgaagagtaaaatacaacccatcaagattttggacagcaaacgttcgcaga 60
Query: 3814 acgtcgggattctagctcagagtctgcacgttgagttctcggagatcgagaacgctatct 3873
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61 acgtcgggattctagctcagagtctgcacgtggagttctcggagatcgagaacgctatct 120
Query: 3874 ataacttcgacacttccgtcgtcagtttggaggctctgcagcagatttatgaattgagag 3933
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataatttcgacacttccgtcgtcagtttggaggctctgcagcagatttatgaattgagag 180
Query: 3934 ccaaagatgaagagctgatgatgatcaaggagcacttgaagactaaacccggcgtgccac 3993
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaaagatgaagagttgatgatgatcaaggagcacttgaagactaaacccggcgtgccac 240
Query: 3994 tggataagcctgaggcgttccttcatgacttatccggaatccacaatttcgcggagagaa 4053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggataagcctgaggcgttccttcatgacttatccggaatccacaatttcgcggagagaa 300
Query: 4054 tatcttgttttacattccaagcggagttcgacgatgcagcaaacacgataatgcacaaat 4113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatcttgttttacattccaagcggagttcgacgatgcagcaaacacgataatgcacaaat 360
Query: 4114 tagataatctgaagcacacttgcgagtttcttgtgacgaacgaatctcttaagcagctgt 4173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagataatctgaagcacacttgcgagtttcttgtgacgaacgaatctcttaagcagctgt 420
Query: 4174 ttgctatcatactggctctcggcaattacatgaacggggggaatggtcaaagaggacagg 4233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgctatcatactggctctcggcaattacatgaacggggggaatggtcaaagaggacagg 480
Query: 4234 ctgatggattcggtctagagatactttctaaattgaaagacgttaagtcgaagcagtccc 4293
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgatggattcggtctggagatactttctaaattgaaagacgttaagtcgaagcagtccc 540
Query: 4294 atataacgctactacacttcatagtacgtacgtacatgcgcgtttcgtcacttggagccc 4353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atataacgctactacacttcatagtacgtacgtacatgcgcgtttcgtcacttggagccc 600
Query: 4354 taccggtgccggagcccggggacgttgcccgcgccgccgccctagacttcgcagaggtcg 4413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taccggtgccggagcccggggacgttgcccgcgccgccgccctagacttcgcagaggtcg 660
Query: 4414 ccacgagtctgaacacgctgcgcactaaccttgacgagtgccgagaaaaggttgaaaaag 4473
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 661 ccacgagtctgaacacgctgcgcactaatcttgacgagtgccgagaaaaagttgaaaaag 720
Query: 4474 ttatcgagacggatgcacggatacaaaagacgga 4507
||||||||||||||||||||||||||||||||||
Sbjct: 721 ttatcgagacggatgcacggatacaaaagacgga 754
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 575,144
Number of extensions: 10781
Number of successful extensions: 10781
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10781
Number of HSP's successfully gapped: 1
Length of query: 5398
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5380
Effective length of database: 8,109,745
Effective search space: 43630428100
Effective search space used: 43630428100
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)