BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15746 (UTR included)
(2188 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A2D11 1570 0.0
>BF01054A2D11
Length = 796
Score = 1570 bits (792), Expect = 0.0
Identities = 795/796 (99%)
Strand = Plus / Plus
Query: 390 tataactcgttgaaatcgtggcacattatgattttaaaggcgttatgttaaaatctataa 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tataactcgttgaaatcgtggcacattatgattttaaaggcgttatgttaaaatctataa 60
Query: 450 taataagaaaaataggaatctacaattttataaatcacattaggtagcaagatgtggtca 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taataagaaaaataggaatctacaattttataaatcacattaggtagcaagatgtggtca 120
Query: 510 ataataattttaataatatactgtgttattgcttatttaatcactgacgaattaatacca 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataataattttaataatatactgtgttattgcttatttaatcactgacgaattaatacca 180
Query: 570 aagttaaagcatttatttattaatgctggtttatatggcatagatttatgcaaagtctca 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagttaaagcatttatttattaatgctggtttatatggcatagatttatgcaaagtctca 240
Query: 630 caagagaaaattccagaagcccttggtgttgtgtcgggatgtatatttttggttacaata 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caagagaaaattccagaagcccttggtgttgtgtcgggatgtatatttttggttacaata 300
Query: 690 ttcttatttataccaatagcttttggaaatgatttgatggataggggaagctttccccat 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcttatttataccaatagcttttggaaatgatttgatggataggggaagctttccccat 360
Query: 750 aatgagtttgcggaactactagcagctttactctctatatgttgtatgttgctactgggc 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatgagtttgcggaactactagcagctttactctctatatgttgtatgttgctactgggc 420
Query: 810 tttgctgatgatgtattgaacctcaagtggagatacaaacttctcctgccaacagtcgca 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttgctgatgatgtattgaacctcaagtggagatacaaacttctcctgccaacagtcgca 480
Query: 870 tcactcccattgttggttgtgtattatgttaacttcaactcaacaacttttgttgtgcca 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcactcccattgttggttgtgtattatgttaacttcaactcaacaacttttgttgtgcca 540
Query: 930 ctcccattgaggcatttttttggagtttctgtgaatatcggttttctgtattatatatat 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctcccattgaggcatttttttggagtttctgtgaatatcggttttctgtattatatatat 600
Query: 990 atgggaatgctggcggttttctgcacaaatgcaattaatattttagctggaataaacggt 1049
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atgggaatgctggcagttttctgcacaaatgcaattaatattttagctggaataaacggt 660
Query: 1050 cttgaagtaggccagtcactagttatagctttgtccataataattttcaatttacttgag 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cttgaagtaggccagtcactagttatagctttgtccataataattttcaatttacttgag 720
Query: 1110 ctaaaaggagatcaattcaaagctcactacttttcattgcatattatgataccttatctt 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctaaaaggagatcaattcaaagctcactacttttcattgcatattatgataccttatctt 780
Query: 1170 tctactacattggctt 1185
||||||||||||||||
Sbjct: 781 tctactacattggctt 796
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 353,212
Number of extensions: 7704
Number of successful extensions: 7704
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7704
Number of HSP's successfully gapped: 1
Length of query: 2188
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2171
Effective length of database: 8,119,229
Effective search space: 17626846159
Effective search space used: 17626846159
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)