BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15750 (UTR included)
(3319 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028B2D01 1324 0.0
>BF01028B2D01
Length = 687
Score = 1324 bits (668), Expect = 0.0
Identities = 684/688 (99%), Gaps = 1/688 (0%)
Strand = Plus / Plus
Query: 2544 ctgcacagtctgctggagaagtgtccgtccatgtccgaggagcagatggtccgtctgctg 2603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgcacagtctgctggagaagtgtccgtccatgtccgaggagcagatggtccgtctgctg 60
Query: 2604 gccctacgaggagatgtgcctcgctcgcacgtgcgggacacagtgacccatgtgcgggcc 2663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccctacgaggagatgtgcctcgctcgcacgtgcgggacacagtgacccatgtgcgggcc 120
Query: 2664 gcacgccagccgccccgcgcgcccccctcaccccgccatcacacagcttttcaaggacat 2723
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 121 gcacgccagccgccccgcgcgcccc-ctcaccccgccatcacacagctcttcaaggacat 179
Query: 2724 caccttcaacgatcgtctgctgtctcatttcactttatgagtgtgagcaggacaacaaat 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 caccttcaacgatcgtctgctgtctcatttcactttatgagtgtgagcaggacaacaaat 239
Query: 2784 aacccgactgaacttacatccgcggaccttcagtgacctgtcacattctactttttaaat 2843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aacccgactgaacttacatccgcggaccttcagtgacctgtcacattctactttttaaat 299
Query: 2844 atgaagaggacattataactaatattcttggcgtcttacgtcatctgtctcatttgattt 2903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atgaagaggacattataactaatattcttggcgtcttacgtcatctgtctcatttgattt 359
Query: 2904 tatgagtgtgaggaggacaacaaataacttgactgaacttaaatccgcggaccctcggtg 2963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tatgagtgtgaggaggacaacaaataacttgactgaacttaaatccgcggaccctcggtg 419
Query: 2964 acctgtttcattttactttttaaatttaaaaaaggaccttattactactcttctcggcgc 3023
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 420 acctgtttcattttactttttaaatttaaaaaaggacgttattactactcttctcggcgc 479
Query: 3024 cttatatcatgcgtctcatttgttactatgaattggaggaggacagaatgtttgcactta 3083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cttatatcatgcgtctcatttgttactatgaattggaggaggacagaatgtttgcactta 539
Query: 3084 cacctctcgacaaatcatcgtctctttaagtatcggcctctattatctgtctaccctcaa 3143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 cacctctcgacaaatcatcgtctctttaagtatcggcctctattatctgtctaccctcaa 599
Query: 3144 cttatgagtataaagatttgccttttagaagtattgtctgctggattcagcaaaaatatc 3203
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 600 cttatgagtataaagatttgccttttagaagtattgcctgctggattcagcaaaaatatc 659
Query: 3204 cgatatacggatgttataatgatggaat 3231
||||||||||||||||||||||||||||
Sbjct: 660 cgatatacggatgttataatgatggaat 687
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 343,682
Number of extensions: 6492
Number of successful extensions: 6492
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6489
Number of HSP's successfully gapped: 1
Length of query: 3319
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3301
Effective length of database: 8,109,745
Effective search space: 26770268245
Effective search space used: 26770268245
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)