BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15754 (UTR included)
(3697 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B1D11 531 e-150
BF01045B1F01 123 2e-27
>BF01054B1D11
Length = 430
Score = 531 bits (268), Expect = e-150
Identities = 350/376 (93%), Gaps = 5/376 (1%)
Strand = Plus / Plus
Query: 1180 gcccaaataaaatatacggttgtgaggtgaggagacgccatcatctcgtcag-gaagaac 1238
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 55 gcccaaataaaatatacggttgtgaggtgaggagacgccatcatctcgtcagagaagaac 114
Query: 1239 ggcggcggttatgaccacgag-gaatatgaagaacatcctgaaagatacatatccgtttt 1297
||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||
Sbjct: 115 ggcggcggttatgaccangatcgaatatgaaaaacatcctgaaagatacatatccgtttt 174
Query: 1298 tgcacaaaagatagctccatacacatcagttttgttgaacggtatctactgggcggtgga 1357
||| |||||||||||||||||||||||| | ||||||| ||||||||||||||||||||
Sbjct: 175 tgcnnaaaagatagctccatacacatcagatctgttgaatggtatctactgggcggtgga 234
Query: 1358 cagtcccaagctcctcactattcctgatgccaagcacctgctgatgccttcacatacacc 1417
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 235 cagtcccaagctcctcactattcctgatgccgagcacctgctgatgccttcacgtacacc 294
Query: 1418 c--tggctgccgaaaagcgttggagcgccggcattgccacatcgaatgctggccatttgc 1475
| |||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 295 cannnnntgccgaaaagcgttggagcgccggcattgccacatcnnntgctggacatttgc 354
Query: 1476 gacatatcag-cggatcctggcggctctatcgagttcatgacagattgtacgaccattga 1534
|||||||| | ||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 355 gacatatcngncggatcccggcggctcgatcgagttcatgacagattgtacgaccattga 414
Query: 1535 cacaccgttctgcctc 1550
||||||||||||||||
Sbjct: 415 cacaccgttctgcctc 430
>BF01045B1F01
Length = 805
Score = 123 bits (62), Expect = 2e-27
Identities = 100/112 (89%), Gaps = 3/112 (2%)
Strand = Plus / Minus
Query: 75 tgcaagaagcctgtttatactcattgaaactgctaatacgatttctaacattgtttatga 134
|||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 794 tgcaagaagcctgtttatgctcactgaaactgctaatacgacttctaacattgtttatga 735
Query: 135 agaaa---tgtagtgaggtacattttctacgcgaacaaagtcgcgggcacag 183
| ||| |||||| || ||| |||||| || ||||||||||||||||||||
Sbjct: 734 ataaattttgtagtaagttactttttctccgtgaacaaagtcgcgggcacag 683
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 361,331
Number of extensions: 7577
Number of successful extensions: 7577
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7572
Number of HSP's successfully gapped: 2
Length of query: 3697
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3679
Effective length of database: 8,109,745
Effective search space: 29835751855
Effective search space used: 29835751855
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)