BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15774 (UTR included)
(1723 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049A1E03 1471 0.0
BF01039B2B03 609 e-174
>BF01049A1E03
Length = 766
Score = 1471 bits (742), Expect = 0.0
Identities = 760/766 (99%)
Strand = Plus / Plus
Query: 471 tagagttggattggattattgtgtagtgcaatggcttactacccccacagaaccgccggt 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagagttggattggattattgtgtagtgcaatggcttactacccccacagaaccgccggt 60
Query: 531 cccacacctcctccaccgttgactgacaagctgcgactgtaccatgtggacatgaatccg 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccacacctcctccaccgttgactgacaagctgcgactgtaccatgtggacatgaatccg 120
Query: 591 tatggtcacagagtgctgttgattctggaggcgaagagggctaagtacgaggtctaccga 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 tatggtcacagagtgctgttgattctggaggcgaagagggctaagtacgaggtctacaga 180
Query: 651 ctggatcccctcaacttaccgcagtggttcaagactaagaatcctagactgaaaatacca 710
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctggatcccctaaacttaccgcagtggttcaagactaagaatcctagactgaaaatacca 240
Query: 711 gtactggaaataccaaccgaccaaggagataaatatctgttcgagagcgtcgtcatctgt 770
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 241 gtactggaaataccaaccgaccaaggagataaatacctgttcgagagcgtcgtcatctgt 300
Query: 771 gactatttggacgagaagtatccacggaacccgctgcattccagagatccgtacgtcaag 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gactatttggacgagaagtatccacggaacccgctgcattccagagatccgtacgtcaag 360
Query: 831 gcccaggacaggttactcattgagaggttcaatgaattaataaaaggcagtttagaatgt 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcccaggacaggttactcattgagaggttcaatgaattaataaaaggcagtttagaatgt 420
Query: 891 ttcgacacaaacttcgcgttcggcggcgagcaaatatttcagactctggacatatttgag 950
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcgacacaaactttgcgttcggcggcgagcaaatatttcagactctggacatatttgag 480
Query: 951 aaggaattagcatcgagaggtacgaattatttcggtggtcattcacccgggatgttggac 1010
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 481 aaggaattagcatcgagaggtacgaattatttcggtggccattcacccgggatgttggac 540
Query: 1011 tacatgatctggccgtgggtggagaggctttatctcctgagatgcgtcaacgagaggaaa 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tacatgatctggccgtgggtggagaggctttatctcctgagatgcgtcaacgagaggaaa 600
Query: 1071 ttcgacgagaaacgaacgctgttccctaatttcgcggactggggcgaccagatgcagttg 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcgacgagaaacgaacgctgttccctaatttcgcggactggggcgaccagatgcagttg 660
Query: 1131 gatgacgtggttaaaaggcattccaactcaccgtcagagtacttcgcgtactacagaaac 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatgacgtggttaaaaggcattccaactcaccgtcagagtacttcgcgtactacagaaac 720
Query: 1191 gcacggactcactccatggggtactacttataagttaacaagtact 1236
||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 721 gcacggactcactccatggggtactacttataagttaacgagtact 766
>BF01039B2B03
Length = 649
Score = 609 bits (307), Expect = e-174
Identities = 357/370 (96%), Gaps = 4/370 (1%)
Strand = Plus / Plus
Query: 1356 tttccaacaaagctatat-atacatggtgtttt-tttttacttcgatcttagtataattt 1413
||||||||| |||||||| |||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 26 tttccaacagagctatattatacatggtgttttctttttacttcgatcttagtattattt 85
Query: 1414 tctaacaaagctatatatacatggtgtttctggtatgataaactgtactctaagaaatac 1473
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 86 tccaacaaagctatatatacatggtgtttctggtatgataaactgtattctaagaaatac 145
Query: 1474 cgaaaatttaagtgttaaattcacaattatttttttttttattaattttgatgtctttct 1533
| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 146 caaaaatttaagtgttaaattcacaattatttt--tttttattaattttgatgtctttct 203
Query: 1534 tatatctaaggaatgtacgattaatgagggatgtaaccgagctcaggcaaggtattaagt 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tatatctaaggaatgtacgattaatgagggatgtaaccgagctcaggcaaggtattaagt 263
Query: 1594 tataataggccttattattcagtaaaacttaattttcatgttgtatatttgaagtcattt 1653
||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||
Sbjct: 264 tataataggccttattattcaatataacttaattttcatgttgtatatttgaaatcattt 323
Query: 1654 aagtacatgttttaatatattccatactaaggtaatattttctcaaggaatcataaattt 1713
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagtacattttttaatatattccatactaaggtaatattttctcaaggaatcataaattt 383
Query: 1714 ttcatataaa 1723
||||||||||
Sbjct: 384 ttcatataaa 393
Score = 73.8 bits (37), Expect = 8e-13
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 1387 ttttttacttcgatcttagtataattttctaacaaagctata-tatacatggtgttt 1442
|||||||||||||||||||||| |||||| |||| ||||||| ||||||||||||||
Sbjct: 1 ttttttacttcgatcttagtatcattttccaacagagctatattatacatggtgttt 57
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 279,495
Number of extensions: 8990
Number of successful extensions: 8990
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8987
Number of HSP's successfully gapped: 3
Length of query: 1723
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1706
Effective length of database: 8,119,229
Effective search space: 13851404674
Effective search space used: 13851404674
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)