BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15833 (UTR included)
(2317 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_306_C1 1390 0.0
>BF14_306_C1
Length = 1041
Score = 1390 bits (701), Expect = 0.0
Identities = 743/757 (98%)
Strand = Plus / Plus
Query: 1001 ccacctccttaaaggcgatcgcgaggcggctgcgtcgtgtctcagcaccatccgcggccg 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccacctccttaaaggcgatcgcgaggcggctgcgtcgtgtctcagcaccatccgcggccg 60
Query: 1061 ttcccgagctggtgtcgaagccgagctcagtctcatcgagactgacgttaaggcttcaat 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcccgagctggtgtcgaagccgagctcagtctcatcgagactgacgttaaggcttcaat 120
Query: 1121 ggaaaaaacagcgacggtaatggacgtgttccaaggcagtaacttcaaggcgttctatat 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggaaaaaacagcgacggtaatggacgtgttccaaggcagtaacttcaaggcgttctatat 180
Query: 1181 atcctgcgctttggtgttcttccaacagttcagtggcatcaacgctgttctgttctacat 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcctgcgctttggtgttcttccaacagttcagtggcatcaacgctgttctgttctacat 240
Query: 1241 gacggacatcttcgagtcctctggcagcgacctccagcctgccatcgcaaccattataat 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacggacatcttcgagtcctctggcagcgacctccagcctgccatcgcaaccattataat 300
Query: 1301 cggagccgttcaggtggtagcgtcttgtatcactcccgtggtggtagaccgtctcggccg 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cggagccgttcaggtggtagcgtcttgtatcactcccgtggtggtagaccgtctcggccg 360
Query: 1361 ccgtctgctgttaatggtgtcagcctgcggtacagcgatcggagccattctgctcggaat 1420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccgtctgctgttaatggtatcagcctgcggtacagcgatcggagccattctgctcggaat 420
Query: 1421 gtttttcctgctgaagcacaatgagagcgaagtggtagcgtcgatcagctttcttcctat 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtttttcctgctgaagcacaatgagagcgaagtggtagcgtcgatcagctttcttcctat 480
Query: 1481 attgtctctggtgctgttcattgtgacgtactgttggggtctcggtcccctgccctgggc 1540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attgtctctggtgctgttcattgtgacgtactgttggggtctcggtcccctgccctgggc 540
Query: 1541 ggtgatgagcgagttattcccaatagaagttaaggctgcagcctcaccgatagctacagc 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggtgatgagcgagttattcccaatagaagttaaggctgcagcctcaccgatagctacagc 600
Query: 1601 gttttgctggctattgtccttcctgattaccaaattcttcccgtccctggaccgtcacgt 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttttgctggctattgtccttcctgattaccaaattcttcccgtccctggaccgtcacgt 660
Query: 1661 tggcttcctcgtgttcggtgggtgttgtgtcgtatctttagtcttctcactgctagtcat 1720
||||||||| ||||||||||||||||||||| | || | |||||| ||||| || |
Sbjct: 661 cggcttcctcatgttcggtgggtgttgtgtcgcggcgttcgccttctcgctgctggttgt 720
Query: 1721 tccagagaccaaaggaaagagcttctctgagatacaa 1757
|||||||||||||||||||||||||||||| ||||||
Sbjct: 721 tccagagaccaaaggaaagagcttctctgaaatacaa 757
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 279,758
Number of extensions: 5899
Number of successful extensions: 5899
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5898
Number of HSP's successfully gapped: 1
Length of query: 2317
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2300
Effective length of database: 8,119,229
Effective search space: 18674226700
Effective search space used: 18674226700
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)