BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15834 (UTR included)
(1927 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_602_C1 1725 0.0
>BF14_602_C1
Length = 918
Score = 1725 bits (870), Expect = 0.0
Identities = 907/918 (98%), Gaps = 1/918 (0%)
Strand = Plus / Plus
Query: 546 aaatatgggatagtggctccccagatttgtcagctgtccactaatgctcaggcatggact 605
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 aaatatgggatagtggctccccagatttgtcacctgtccactaatgctcaggcatggact 60
Query: 606 aagagtaggaaattgtggttgaccacattaggtgtgggtgcgggaggtgtgggagcctta 665
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 aagagtaggaaattgtggttgaccacattaggtgtgggtgcgggaggtgtgggtgcctta 120
Query: 666 ctgttcgcattggaacagtcagtacaggcttcaggcacggaagcacatccctaccaccag 725
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgtttgcattggaacagtcggtacaggcttcaggcacggaagcacatccctaccaccaa 180
Query: 726 ccttggagccacaatggatggttccaatctcttgatcatgccagtattcggcgaggctat 785
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 181 ccttggagccacaatggatggttccaatctcttgatcatgccagtattcggcgaggttat 240
Query: 786 gaagtttacaagcaagtatgcaaggcttgccactctttacagtacattgcctaccgtaac 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagtttacaagcaagtatgcaaggcttgccactctttacagtacattgcctaccgtaac 300
Query: 846 ttagtcaatgtgagccatactgaggag-gaggcgaaggcagaagctgctgaggtcatgat 904
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 301 ttagtcaatgtgagccatactgaggagngaggcaaaggcagaagctgctgaggtcatgat 360
Query: 905 taaggacggtcctgatgaggagggcaactattttgaacgtccaggaaaactatccgacta 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taaggacggtcctgatgaggagggcaactattttgaacgtccaggaaaactatccgacta 420
Query: 965 cttcccatcaccataccccaatgaaaatgcagctcgagctgctaacaacggtgcctatcc 1024
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 421 cttcccatcaccataccccaatgaaaacgcagctcgagctgctaacaacggtgcctatcc 480
Query: 1025 tccggatctatctttgatagtgtctggtcgtaagggcggcgaggattacatcttcgctct 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tccggatctatctttgatagtgtctggtcgtaagggcggcgaggattacatcttcgctct 540
Query: 1085 cctgacgggttacatggaagcaccggctggggtcatactgcgtgagggacagaactacaa 1144
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 541 cctgacgggttacatggaagcaccagctggggtcatactgcgtgagggacagaactacaa 600
Query: 1145 cccatacttccctggtggtgccatttctatggcacaagttttgttcgatgaggctgcgga 1204
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cccatacttccccggtggtgccatttctatggcacaagttttgttcgatgaggctgcgga 660
Query: 1205 atacactgatggtactccagcgacggcttcccagttggcaaaggacgtggcaactttcct 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atacactgatggtactccagcgacggcttcccagttggcaaaggacgtggcaactttcct 720
Query: 1265 acgttggtgctctgaaccagagctggacgatcgccgcctcatgacgatcaaggccattgg 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 acgttggtgctctgaaccagagctggacgatcgccgcctcatgacgatcaaggccattgg 780
Query: 1325 aatattttccttcctagccgccatcgtgtactactataaacggcacaagtggtccacaat 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aatattttccttcctagccgccatcgtgtactactataaacggcacaagtggtccacaat 840
Query: 1385 gaagtcccgcaaactagcctacaaagcggtatctaagaagtaaagagtagcgtaaaggat 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gaagtcccgcaaactagcctacaaagcggtatctaagaagtaaagagtagcgtaaaggat 900
Query: 1445 actatttagacaattttt 1462
||||||||||||||||||
Sbjct: 901 actatttagacaattttt 918
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 325,773
Number of extensions: 20081
Number of successful extensions: 20081
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20079
Number of HSP's successfully gapped: 1
Length of query: 1927
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1910
Effective length of database: 8,119,229
Effective search space: 15507727390
Effective search space used: 15507727390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)