BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15835 (UTR included)
(2155 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B1E01 1501 0.0
BF01062A1B10 803 0.0
>BF01050B1E01
Length = 798
Score = 1501 bits (757), Expect = 0.0
Identities = 788/798 (98%), Gaps = 1/798 (0%)
Strand = Plus / Plus
Query: 396 tcattaattatgtattgccaatagaaaccaaaagtctatgtagtaacttaatgtcaatat 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcattaattatgtattgccaatagaaaccaaaagtctatgtagtaacttaatgtcaatat 60
Query: 456 atactgtccccctttaataaaa-aaaatattggaacatatataaatatgaatgcaattgt 514
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 atactgtccccctttaataaaaaaaaatattggaacatatataaatatgaatgcaattgt 120
Query: 515 tggtttttgtcatttctgtgaggctcatggaccaagaccagtattttgtacatatactac 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggtttttgtcatttctgtgaggctcatggaccaagaccagtattttgtacatatactac 180
Query: 575 tgaagacgaacaacacaccaccgagccctctaaaaatgcagtacagtgcaatggctgtac 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaagacgaacaacacaccaccgagccctctaaaaatgcagtacagtgcaatggctgtac 240
Query: 635 atctataggttcagaaatggtactaatatcaagagatggtgatacaatcttttgtagcag 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atctataggttcagaaatggtactaatatcaagagatggtgatacaatcttttgtagcag 300
Query: 695 ggaatctgttccaaatcctgaagttacctcttttttgagacaagctgctttaagaagtat 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggaatctgttccaaatcctgaagttacctcttttttgagacaagctgctttaagaagtat 360
Query: 755 tacttgtgaagtaaattggagtaaagaaggtggagtggtttatttcagtgatacacaagg 814
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 361 tacttgtgaagtaaattggagtaaagaaggtggagtggtttatttcagtgacacacaagg 420
Query: 815 agatgtgctcagctctacatttcaattaaaggatactagatcaaggggattgaaaaggtt 874
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 421 agatgtgctcagttctacatttcaattaaaggatactaggtcaaggggattgaaaaggtt 480
Query: 875 gttctcaattgttgttttaatgaaggataaaatgttactattaaatattacaccagtact 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gttctcaattgttgttttaatgaaggataaaatgttactattaaatattacaccagtact 540
Query: 935 ctcagaacacatgcagaaaattgcaaaagaactgcaaaatctagctaatgaggtctatga 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctcagaacacatgcagaaaattgcaaaagaactgcaaaatctagctaatgaggtctatga 600
Query: 995 acaagaacaaagtatatgctctcaaagagctttaaggcttaagacaggacgacatgactt 1054
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 601 acaagaacaaagtatatgctctcaaagagctttaaggcttaaaacaggacgacatgactt 660
Query: 1055 tggccagtcccgatccttagtacaattaacaggagatgcagacatttttaaaaaactcca 1114
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 661 tggccagtcccgatccttagtacaattaacaggagatgcagatatttttaaaaaactcca 720
Query: 1115 ctctcattttacacacatcctcagaataggttcagtaacttattctgaaactttatatac 1174
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 721 ctctcattttacacacatcctcagaatnnntgcagtaacttattctgaaactttatatac 780
Query: 1175 aagtcatggcttacttaa 1192
||||||||||||||||||
Sbjct: 781 aagtcatggcttacttaa 798
>BF01062A1B10
Length = 826
Score = 803 bits (405), Expect = 0.0
Identities = 420/425 (98%)
Strand = Plus / Plus
Query: 807 acacaaggagatgtgctcagctctacatttcaattaaaggatactagatcaaggggattg 866
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 402 acacaaggagatgtgctcagctctacctttcaattaaaggatactaggtcaaggggattg 461
Query: 867 aaaaggttgttctcaattgttgttttaatgaaggataaaatgttactattaaatattaca 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aaaaggttgttctcaattgttgttttaatgaaggataaaatgttactattaaatattaca 521
Query: 927 ccagtactctcagaacacatgcagaaaattgcaaaagaactgcaaaatctagctaatgag 986
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 522 ccagtactctcagaacacatgcagaaaattgcaaaagaactgcaaaatttagctaatgag 581
Query: 987 gtctatgaacaagaacaaagtatatgctctcaaagagctttaaggcttaagacaggacga 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gtctatgaacaagaacaaagtatatgctctcaaagagctttaaggcttaagacaggacga 641
Query: 1047 catgactttggccagtcccgatccttagtacaattaacaggagatgcagacatttttaaa 1106
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 642 catgactttggccagtcccgatccttagtacaattaacaggagatgcagatatttttaaa 701
Query: 1107 aaactccactctcattttacacacatcctcagaataggttcagtaacttattctgaaact 1166
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 702 aaactccactctcattttacacacatcctcagaataggtgcagtaacttattctgaaact 761
Query: 1167 ttatatacaagtcatggcttacttaataaaatcactccacaattaactagcaacacaata 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 ttatatacaagtcatggcttacttaataaaatcactccacaattaactagcaacacaata 821
Query: 1227 tttca 1231
|||||
Sbjct: 822 tttca 826
Score = 726 bits (366), Expect = 0.0
Identities = 392/398 (98%), Gaps = 2/398 (0%)
Strand = Plus / Plus
Query: 368 caatgaacaatacaaagactggtatcagtcattaattatgtattgccaatagaaaccaaa 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caatgaacaatacaaagactggtatcagtcattaattatgtattgccaatagaaaccaaa 60
Query: 428 agtctatgtagtaacttaatgtcaatatatactgtccccctttaat-aaaaaaaatattg 486
||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 61 agtctatgtagtaacttaatgtctatatatactgt-cccctttaataaaaaaaaatattg 119
Query: 487 gaacatatataaatatgaatgcaattgttggtttttgtcatttctgtgaggctcatggac 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gaacatatataaatatgaatgcaattgttggtttttgtcatttctgtgaggctcatggac 179
Query: 547 caagaccagtattttgtacatatactactgaagacgaacaacacaccaccgagccctcta 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 caagaccagtattttgtacatatactactgaagacgaacaacacaccaccgagccctcta 239
Query: 607 aaaatgcagtacagtgcaatggctgtacatctataggttcagaaatggtactaatatcaa 666
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 240 aaaatgcggtacagtgcaatggctgtacttctataggttcagaaatggtactaatatcaa 299
Query: 667 gagatggtgatacaatcttttgtagcagggaatctgttccaaatcctgaagttacctctt 726
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gagatggcgatacaatcttttgtagcagggaatctgttccaaatcctgaagttacctctt 359
Query: 727 ttttgagacaagctgctttaagaagtattacttgtgaa 764
||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttttgagacaagctgctttaagaagtattacttgtgaa 397
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 297,627
Number of extensions: 6217
Number of successful extensions: 6217
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6215
Number of HSP's successfully gapped: 3
Length of query: 2155
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2138
Effective length of database: 8,119,229
Effective search space: 17358911602
Effective search space used: 17358911602
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)