BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15837 (UTR included)
(1759 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A2H07 1400 0.0
BF14_1498_C1 285 1e-76
>BF01040A2H07
Length = 748
Score = 1400 bits (706), Expect = 0.0
Identities = 730/739 (98%)
Strand = Plus / Plus
Query: 454 ggttgcagcattcgggcgcagtcctctcaaaatagaaaaatatcgcaatggagttaaaag 513
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 10 ggttgcagcattcgggcgcagtcctctcaaaatagaaatatatcgcaatggagttaaaag 69
Query: 514 ggaaggttgctttaataactggtgccgcggccggcatcgggctagcttatagcgaagaat 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 ggaaggttgctttaataactggtgccgcggccggcatcgggctagcttatagcgaagaat 129
Query: 574 tattaaaacaaggagcgaaggtgtcactctgtgatatcgattctgaaataggagaacagg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tattaaaacaaggagcgaaggtgtcactctgtgatatcgattctgaaataggagaacagg 189
Query: 634 tggccgatgagctgggtgttaagtatggaaggaaaaacgtgctgttctgtcaatgtgacg 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tggccgatgagctgggtgttaagtatggaaggaaaaacgtgctgttctgtcaatgtgacg 249
Query: 694 tcacggactatccgcaatatgaagaagcgtttgagatgacaataaaggttttcaatcgac 753
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tcactgactatccgcaatatgaagaagcgtttgagatgacaataaaggttttcaatcgac 309
Query: 754 tcgacatcgttattaataacgctggtgttatgaacgatagattctgggaactcgaagtcg 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tcgacatcgttattaataacgctggtgttatgaacgatagattctgggaactcgaagtcg 369
Query: 814 acgttaatttgaacggtgttattcgtggtactctgttggcgtaccgtttcatgggtaaag 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 acgttaatttgaacggtgttattcgtggtactctgttggcgtaccgtttcatgggtaaag 429
Query: 874 accgcggcggcgctggtggtaccatcgtcaacacagcctcaacagccttcgtccgtcccc 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 accgcggcggcgctggtggtaccatcgtcaacacagcctcaacagccttcgtccgtcccc 489
Query: 934 aagtttccactcctatatacaccgccactaattatgctgtcgtcggcctaacaaggtctt 993
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aagtctccactcctatatacaccgccactaattatgctgtcgtcggcctaacaaggtctt 549
Query: 994 atggggaccaataccacgtgagcctcacgggcgttcgcagtatagcactcctggccgggc 1053
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 550 atggggaccaataccacgtgagcctcacgggcgttcgcagcatagcactcctggccgggc 609
Query: 1054 tcacagacacggggcttgttaaggaaatacggaaacaactaatgtcgtccgactacgagg 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tcacagacacggggcttgttaaggaaatacggaaacaactaatgtcgtccgactacgagg 669
Query: 1114 cagcgtggcagagggataacgcgaattctaaagctcaaagtcctgagcacgtgggtcgaa 1173
||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 670 cagcgtggcagnnngataacgcgaattctaaagctcagagtccggagcacgtgggtcgaa 729
Query: 1174 ccctgatcgacgtgttgat 1192
|||||||||||||||||||
Sbjct: 730 ccctgatcgacgtgttgat 748
>BF14_1498_C1
Length = 900
Score = 285 bits (144), Expect = 1e-76
Identities = 150/152 (98%)
Strand = Plus / Plus
Query: 1608 tcgacatatctggtgaaggtttagacataaaatctttaaatattttatcaacacattttc 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgacatatctggtgaaggtttagacataaaatctttaaatattttatcaacacattttc 60
Query: 1668 ctgtattacctttatttagattaaatttaaggtgggttcacacgtaactcatgtatgctc 1727
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgtattacatttatttagataaaatttaaggtgggttcacacgtaactcatgtatgctc 120
Query: 1728 aatgaatgtagcgagtattgaatgctttataa 1759
||||||||||||||||||||||||||||||||
Sbjct: 121 aatgaatgtagcgagtattgaatgctttataa 152
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 191,293
Number of extensions: 3631
Number of successful extensions: 3631
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3631
Number of HSP's successfully gapped: 2
Length of query: 1759
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1742
Effective length of database: 8,119,229
Effective search space: 14143696918
Effective search space used: 14143696918
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)