BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15839 (UTR included)
(1471 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015A1G05 640 0.0
>BF01015A1G05
Length = 723
Score = 640 bits (323), Expect = 0.0
Identities = 329/332 (99%)
Strand = Plus / Plus
Query: 557 acttactattctgattcttatattagaatctcaattagctgataccctctctggcagcca 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 acttactattctgattcttatattagaatctcaattagctgataccctctctggcagcca 451
Query: 617 gaagatgaaaaacaaaacatttccaacagaaaataattcgacttgctggctacatcaacc 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gaagatgaaaaacaaaacatttccaacagaaaataattcgacttgctggctacatcaacc 511
Query: 677 atatactataattaatgaatgtcatccttgctcagattttgaaattcgaagcaaaagcat 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 atatactataattaatgaatgtcatccttgctcagattttgaaattcgaagcaaaagcat 571
Query: 737 tggtgtttgcatacatacaagttttaaggaaattttaaaatgtgcaaatggtgaaacagt 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tggtgtttgcatacatacaagttttaaggaaattttaaaatgtgcaaatggtgaaacagt 631
Query: 797 aactcgaagctgtgatcgcgtcgcatatttagaagaaagggcttattggaaatttaccat 856
||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 632 aactcgaagctgtgatcgcgtcgcatatttagannaaagggcttattggaantttaccat 691
Query: 857 ctggtcattggtcttgggtatggcatcatcaa 888
||||||||||||||||||||||||||||||||
Sbjct: 692 ctggtcattggtcttgggtatggcatcatcaa 723
Score = 585 bits (295), Expect = e-167
Identities = 308/313 (98%)
Strand = Plus / Plus
Query: 244 gaaggatttgttgtttataacttaacagctaaatatattgacattgacaagaaaaagtaa 303
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gaaggatttgttgtttataacttaacagctanntatattgacattgacaagaaaaagtaa 60
Query: 304 cttgaaagaaattctttaatcctactgattgtcttacttcttaatttcattacaaaaatg 363
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 cttgaaagaaattctttaatcctactgattgtcttacttctttatttcattacaaaaatg 120
Query: 364 ttttaacaagaagatttaacgagataaaaataattctcagtatgattcaggttctccgag 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 121 ttttaacaagaagatttaacgagataaaaataattctcagtatgattcaggttctctgag 180
Query: 424 tccttgggaatttatgattatattcattgtcaattgtgtttgtttttgctacatagtcct 483
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccttgggaatttatgattatatacattgtcaattgtgtttgtttttgctacatagtcct 240
Query: 484 cttccatatattgaaaaatgatcgaaacttgttcaaaaagatgcatgttactggggacta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttccatatattgaaaaatgatcgaaacttgttcaaaaagatgcatgttactggggacta 300
Query: 544 tttcgttaggagt 556
|||||||||||||
Sbjct: 301 tttcgttaggagt 313
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 296,617
Number of extensions: 13619
Number of successful extensions: 13619
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13619
Number of HSP's successfully gapped: 2
Length of query: 1471
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1454
Effective length of database: 8,119,229
Effective search space: 11805358966
Effective search space used: 11805358966
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)