BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15840 (UTR included)
(1996 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B1D02 1112 0.0
>BF01037B1D02
Length = 573
Score = 1112 bits (561), Expect = 0.0
Identities = 570/573 (99%)
Strand = Plus / Plus
Query: 583 aagaaacattttatattcgtttaaaaaagaaaacaccatttcgcgtaagattaacctcta 642
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 aagaaacattttatattcgtttaaaaaagaaaaccccatttcgcgtaagattaacctcta 60
Query: 643 agagattgtctttaataaaagacgattcatcaaaagaacaaacgatacccttgcaagaca 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagattgtctttaataaaagacgattcatcaaaagaacaaacgatacccttgcaagaca 120
Query: 703 ttattggaagtaaatgtatgagaagcaaaagacggcgcgttggtgctggttcttgtgttt 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttattggaagtaaatgtatgagaagcaaaagacggcgcgttggtgctggttcttgtgttt 180
Query: 763 gcaggtcatttgtgggtaaaccaccactgaaagtcgttgatgaggatagcggtgaccttg 822
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcaggtcatttgtgggtaaacctccactgaaagtcgttgatgaggatagcggtgaccttg 240
Query: 823 atgaaaatgatataagtgcatatctttatatttacgcttataatttaaagcgcagccgcc 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgaaaatgatataagtgcatatctttatatttacgcttataatttaaagcgcagccgcc 300
Query: 883 gttctcttaagcgagagcggacaacaataacattgcagtttcgatcgtatgataaatatg 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttctcttaagcgagagcggacaacaataacattgcagtttcgatcgtatgataaatatg 360
Query: 943 aagataataacagagaagcgcaaaggtggcgaaatacaattaaatgtttgatagcaaacg 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagataataacagagaagcgcaaaggtggcgaaatacaattaaatgtttgatagcaaacg 420
Query: 1003 aaccgataacaaatgtggtgccgcaaaacgataagaaacttttaatacttataaatccga 1062
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaccgataacaaacgtggtgccgcaaaacgataagaaacttttaatacttataaatccga 480
Query: 1063 aatccggttcaggtaaggccgtcgaactatttcaagctaaagttgcgactatcttaaacg 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatccggttcaggtaaggccgtcgaactatttcaagctaaagttgcgactatcttaaacg 540
Query: 1123 aagctgagattccttactaccttcgcgtgactg 1155
|||||||||||||||||||||||||||||||||
Sbjct: 541 aagctgagattccttactaccttcgcgtgactg 573
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,803
Number of extensions: 5394
Number of successful extensions: 5394
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5394
Number of HSP's successfully gapped: 1
Length of query: 1996
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1979
Effective length of database: 8,119,229
Effective search space: 16067954191
Effective search space used: 16067954191
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)