BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15843 (UTR included)
(2983 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043B2F12 1172 0.0
BF01028A1D12 1092 0.0
>BF01043B2F12
Length = 807
Score = 1172 bits (591), Expect = 0.0
Identities = 698/737 (94%), Gaps = 22/737 (2%)
Strand = Plus / Plus
Query: 1189 aggcgggacagacccggccacgacccagttccaggacacgccagcgacaacccagcggca 1248
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aggcgggacagacccggccacgacccagttccaggannngccagcgacaacccagcggca 60
Query: 1249 gccacaacccgcccgctgaacatatggacatggttcaaaacaactacaaccgcggcggga 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccacaacccgcccgctgaacatatggacatggttcaaaacaactacaaccgcggcgg-- 118
Query: 1309 ccgcgccagccagggcgccgg--gtggtcgtgggttcgtgcctcgcaacaaaaacacgct 1366
| | | | | | | ||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 119 ctggcgcggtcggtcccgcggccgtggtcgggggttcgtgcctcgcaacaaaaacacgct 178
Query: 1367 caagttcgagaaagactacgattttgaacaggccaacactcagttcgaggaactacgtat 1426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 caagttcgagaaagactacgattttgaacaggccaacactcagttcgaggaactacgtat 238
Query: 1427 acagctggctaagactaagatagccgacggggatgttaaaactgagggtgaagttgacaa 1486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 acagctggctaagactaagatagccgacggggatgttaaaactgagggtgaagttgacaa 298
Query: 1487 gaaggatgactccggcaacgagaccggcgcgggggaggcggagctcgaggagcatgacgt 1546
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 299 gaaggatgactccggcaacgagaccggcgcgggggaggcggagctcgaggaacatgacgt 358
Query: 1547 tatcgccggctacgacaagaaaaagagcttctttgataatatttcatgcgaggctgtgga 1606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tatcgccggctacgacaagaaaaagagcttctttgataatatttcatgcgaggctgtgga 418
Query: 1607 gaggtcgaagggtcgcagccagaggacggattggcggacggagcgcaagctgaactcgga 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gaggtcgaagggtcgcagccagaggacggattggcggacggagcgcaagctgaactcgga 478
Query: 1667 gacgttcggggtgtcgtcggcgaggcgcggggcctggagaccgcgagcatcctggaggca 1726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gacgttcggggtgtcgtcggcgaggcgcggggcctggagaccgcgagcatcctggaggca 538
Query: 1727 cggcccgcaccctccgcacggacacatgcaccaccctcacccccacccgcactctcaccc 1786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 cggcccgcaccctccgcacggacacatgcaccaccctcacccccacccgcactctcaccc 598
Query: 1787 tccggctcatcc------------------ctggcggccgatgcgaggcggtcgcggtcg 1828
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 599 accggctcatcctatgtcgtacttccccagctggcggccgatgcgaggcggtcgcggtcg 658
Query: 1829 ccccaacaacaacccgaacgctcgccgcaacaccgcgccgccgccgcagacgcagccgca 1888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ccccaacaacaacccgaacgctcgccgcaacaccgcgccgccgccgcagacgcagccgca 718
Query: 1889 gccgcagtccgcagctg 1905
|||||||||||||||||
Sbjct: 719 gccgcagtccgcagctg 735
>BF01028A1D12
Length = 591
Score = 1092 bits (551), Expect = 0.0
Identities = 557/559 (99%)
Strand = Plus / Plus
Query: 1951 ataaacacgacaggaaagtcaggcgtactgaagttaaatctcaagatgtatacttgaggt 2010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaacacgacaggaaagtcaggcgtactgaagttaaatctcaagatgtatacttgaggt 60
Query: 2011 tgcttgtaaagttatacagatacttggcgagacgtacaaatgccaagttcaatcagatcg 2070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcttgtaaagttatacagatacttggcgagacgtacaaatgccaagttcaatcagatcg 120
Query: 2071 ttctgcggcgtttgttcatgagccgtatcaacagggctccaatttccctgtctcgtttgg 2130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttctgcggcgtttgttcatgagccgtatcaacagggctccaatttccctgtctcgtttgg 180
Query: 2131 ctcgccacatgaagaagcctacccgtgaaggacttattgccgtggtggtgggttcagtaa 2190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcgccacatgaagaagcctacccgtgaaggacttattgccgtggtggtgggttcagtaa 240
Query: 2191 ccaacgacgtgaggttgtacaacgtccccaagctgactgttgccgctcttcacgtcactg 2250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccaacgacgtgaggttgtacaacgtccccaagctgactgttgccgctcttcacgtcactg 300
Query: 2251 agaaggctcgcgcccgtatcttggcagctggaggcgaaatcctaacattcgaccagctag 2310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaaggctcgcgcccgtatcttggcagctggaggcgaaatcctaacattcgaccagctag 360
Query: 2311 cactccgtgcgcccaccggccgtaagacagtcctcgtccagggccgtaggaacgctcgtg 2370
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 361 cactccgtgcgcccaccggccgtaagacagtcctcgtccagggccgcaggaacgctcgtg 420
Query: 2371 aggctgtccgtcacttcggcccggccccaggcgctcctcgctctcacacgaagccctacg 2430
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 421 aggctgtccgtcacttcggcccagccccaggcgctcctcgctctcacacgaagccctacg 480
Query: 2431 tacgttccaagggacacgagcgctccagacctagccgtcgctctaatgtataatcatttt 2490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tacgttccaagggacacgagcgctccagacctagccgtcgctctaatgtataatcatttt 540
Query: 2491 aatataaggagtacaacct 2509
|||||||||||||||||||
Sbjct: 541 aatataaggagtacaacct 559
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 313,007
Number of extensions: 7166
Number of successful extensions: 7166
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7164
Number of HSP's successfully gapped: 4
Length of query: 2983
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2965
Effective length of database: 8,109,745
Effective search space: 24045393925
Effective search space used: 24045393925
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)