BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15848 (UTR included)
(1759 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_754_C1 1756 0.0
>BF14_754_C1
Length = 898
Score = 1756 bits (886), Expect = 0.0
Identities = 895/898 (99%)
Strand = Plus / Plus
Query: 92 ctgttgtcgtgaacttaaataatataggcaatagtgattctacattgattttcatggcga 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgttgtcgtgaacttaaataatataggcaatagtgattctacattgattttcatggcga 60
Query: 152 tttaaaatttttgttaattcataacgttcacaatttcagctgtatggatttaagtacaga 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttaaaatttttgttaattcataacgttcacaatttcagctgtatggatttaagtacaga 120
Query: 212 tcgtggcataaaataactaaaactgaactgataaaaaataaaacattggcctccggagct 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgtggcataaaataactaaaactgaactgataaaaaataaaacattggcctccggagct 180
Query: 272 gtgatggaatcttactttaacgatacaagcagacgaaaaaagtctacagtggagggttac 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgatggaatcttactttaacgatacaagcagacgaaaaaagtctacagtggagggttac 240
Query: 332 aaatgattagtaatacaacttctaagacactcttataatttggttgatcgctgatcgaca 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaatgattagtaatacaacttctaagacactcttataatttggttgatcgctgatcgaca 300
Query: 392 cattttatgtgcgcgtgaaggtgacatgagcacaaacaagaggcgcggagctagcagttc 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cattttatgtgcgcgtgaaggtgacatgagcacaaacaagaggcgcggagctagcagttc 360
Query: 452 cagttgtaccgtccccggggtgccagcgctcgtgaacgtgtcgaccgcgatgtccgcaga 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagttgtaccgtccccggggtgccagcgctcgtgaacgtgtcgaccgcgatgtccgcaga 420
Query: 512 cctagcgtcactgttcgaatgcccggtgtgtttcgattatgtactgccacccatcctgca 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctagcgtcactgttcgaatgcccggtgtgtttcgattatgtactgccacccatcctgca 480
Query: 572 atgccaaagcgggcacctcgtgtgctcgagctgtcgccccaaattgtcctgctgcccgac 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgccaaagcgggcacctcgtgtgctcgagctgtcgccccaaattgtcctgctgcccgac 540
Query: 632 ctgccgcggccccctcggcaacatccgcaacctggccatggaaaaagttgctagtaacgt 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctgccgcggccccctcggcaacatccgcaacctggccatggaaaaagttgctagtaacgt 600
Query: 692 aatgtttccttgcaagcattctaacacaggttgcacagtcacccttgtccatacagaaaa 751
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gatgtttccttgcaagcactctaacacaggttgcacagtcacccttgtccatacagaaaa 660
Query: 752 agcggaacatgaggaagcatgtgagttcaggccctattcctgcccctgtccaggagcctc 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agcggaacatgaggaagcatgtgagttcaggccctattcctgcccctgtccaggagcctc 720
Query: 812 atgcaagtggcaaggtggtctggaccaggttatgccacaccttatgatgtctcacaaaag 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atgcaagtggcaaggtggtctggaccaggttatgccacaccttatgatgtctcacaaaag 780
Query: 872 cattacaacgctgcaaggtgaagatatagtgtttctggctactgacattaatctgcccgg 931
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cattacaacactgcaaggtgaagatatagtgtttctggctactgacattaatctgcccgg 840
Query: 932 agctgtcgattgggtgatgatgcagtcttgtttcaatcatcattttatgttagtacta 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agctgtcgattgggtgatgatgcagtcttgtttcaatcatcattttatgttagtacta 898
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 227,271
Number of extensions: 11143
Number of successful extensions: 11143
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11143
Number of HSP's successfully gapped: 1
Length of query: 1759
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1742
Effective length of database: 8,119,229
Effective search space: 14143696918
Effective search space used: 14143696918
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)