BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15877 (UTR included)
(4138 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048B1H04 1584 0.0
>BF01048B1H04
Length = 848
Score = 1584 bits (799), Expect = 0.0
Identities = 826/835 (98%)
Strand = Plus / Plus
Query: 3082 cagctcgcccggaaggcgccacccacaccgagatgaacgtcgacagcgtagcagacctcg 3141
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 14 cagctcgcccggaaggcgccactcacaccgagatgaacgtcgacagcgtagcagacctcg 73
Query: 3142 ttcaccgcgcctcctccatcattataactcccggttatggtctgtgtgtggccaaagctc 3201
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 74 ttcaccgcgcttcctccatcattataactcccggatatggtctgtgtgtggccaaagctc 133
Query: 3202 agtatcccatcgccgaattggtggacattcttaaaggcatcggaaaaaaagtgcgctttg 3261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 agtatcccatcgccgaattggtggacattcttaaaggcatcggaaaaaaagtgcgctttg 193
Query: 3262 ctatacatccagttgctggacgtatgcccggtcaactgaacgtgctgctcgctgaagccg 3321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ctatacatccagttgctggacgtatgcccggtcaactgaacgtgctgctcgctgaagccg 253
Query: 3322 gtgtgccctatgacgacgtgttcgagatggaggaaatcaacgatgaattcccggaaactg 3381
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 254 gtgtgccctatgacgacgtgttcgagatggaggaaatcaacgatgaattcctggaaactg 313
Query: 3382 acttggtcttagttataggcgccaacgacaccgtgaacagtgctgctgaggacgacccgg 3441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 acttggtcttagttataggcgccaacgacaccgtgaacagtgctgctgaggacgacccgg 373
Query: 3442 agtctcccatagccggcatgccggtgctcaaagtgtggaaggcgaaccaagtggtagtga 3501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agtctcccatagccggcatgccggtgctcaaagtgtggaaggcgaaccaagtggtagtga 433
Query: 3502 tgaagaggtctatgggtgtcggctacgcggcagttgataaccccatattctacaacccca 3561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tgaagaggtctatgggtgtcggctacgcggcagttgataaccccatattctacaacccca 493
Query: 3562 acaccgccatgttgttgggagacgccaagaagacttgcgacgcacttctcgacagaatca 3621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 acaccgccatgttgttgggagacgccaagaagacttgcgacgcacttctcgacagaatca 553
Query: 3622 aacatctcgctgcataaattaataacaaataatatgcacatataagtaatttctgaagag 3681
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 554 aacatctcgctgcataaattaataacaaataatatgcacatataaataatttctgaagag 613
Query: 3682 tttttagatccttaaaagaatttaattgatcaagaaatcaattttatatccaatattgga 3741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tttttagatccttaaaagaatttaattgatcaagaaatcaattttatatccaatattgga 673
Query: 3742 atccttcaatcatgtgactgatcattcttatgaaatagaaaaatattgtcggcgtataat 3801
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 674 atccttcaatcatgtgactgatcattcttatgaaatagaaaaatatagtcggcgtataat 733
Query: 3802 aactgagagaaccatatttaatatttttaaaccaatcacacagtcccctgtgtccatttt 3861
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 734 aactgagagaaccatgtttaatatttttaaaccagtcacacagtcccctgtgtccatttt 793
Query: 3862 gttgtcaaatagtgtctgaagattagcactcatacattttttagtctgtgacgat 3916
||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gttgtcaaatagtgtttgaagattagcactcatacattttttagtctgtgacgat 848
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 419,022
Number of extensions: 10030
Number of successful extensions: 10030
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10030
Number of HSP's successfully gapped: 1
Length of query: 4138
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4120
Effective length of database: 8,109,745
Effective search space: 33412149400
Effective search space used: 33412149400
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)