BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15880 (UTR included)
(2518 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1020_C1 1735 0.0
>BF14_1020_C1
Length = 899
Score = 1735 bits (875), Expect = 0.0
Identities = 894/900 (99%), Gaps = 1/900 (0%)
Strand = Plus / Plus
Query: 356 tctatggcgttattttttaagaaatcgctagattaataactactgatttgattcaatgca 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctatggcgttattttttaagaaatcgctagattaataactactgatttgattcaatgca 60
Query: 416 aaatatccaaaacattatgactatacaatttgtaaattgtaattgtatcaattaattctc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatatccaaaacattatgactatacaatttgtaaattgtaattgtatcaattaattctc 120
Query: 476 caagtgtagagttaaatgtgtaaacatgagtttttccattgatgaagtgaattttctcgt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caagtgtagagttaaatgtgtaaacatgagtttttccattgatgaagtgaattttctcgt 180
Query: 536 gtatcgatacttacaggagtccggattccatcattcagcttatacatttggaattgaatc 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtatcgatacttacaggagtccggattccatcattcagcttatacatttggaattgaatc 240
Query: 596 acatatatcccaaagcaatataaatggagccttagttccgccggcagcattgttaaatat 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acatatatcccaaagcaatataaatggagccttagttccgccggcagcattgttaaatat 300
Query: 656 tctgcagaagggtttgcaatataccgaagccgaaataactataggagaagatggaactga 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctgcagaagggtttgcaatataccgaagccgaaataactataggagaagatggaactga 360
Query: 716 aacacgtcttacagagagcctgagtttaattgatgctgtaactccggatattgtttccac 775
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 361 aacacgtcttacagagagcctgagtttaattgatgctgtaactccagatattgtttccac 420
Query: 776 tcgtcaaaatgctcataatgctcaaaagcaagctaataaagaaccagggtctggtggaga 835
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 421 tcgtcaaaatgctcataatgctcaaaagcaagctaataaagaaccaggttctggtggaga 480
Query: 836 acaaaacggagttgatggaacagcatgtagtgcagcatcaactacaggaggtacagtaac 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acaaaacggagttgatggaacagcatgtagtgcagcatcaactacaggaggtacagtaac 540
Query: 896 accaaatgtaccagaaaatatggatgttgatcaatcaatcgaaataccagcaagcaaggc 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 accaaatgtaccagaaaatatggatgttgatcaatcaatcgaaataccagcaagcaaggc 600
Query: 956 gacagtactacgaggacatgaatctgaagtgtttatttgcgcttggaatccaagcactga 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gacagtactacgaggacatgaatctgaagtgtttatttgcgcttggaatccaagcactga 660
Query: 1016 tttattggctagtggctcaggagatagtactgctcgaatatgggacatgtcagacaatcc 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tttattggctagtggctcaggagatagtactgctcgaatatgggacatgtcagacaatcc 720
Query: 1076 agcaactacccctaatcagcttatattaagacattgtattcaaaaaggtggagctgaggt 1135
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 721 agcaactacccctaatcagcttatattaagacatt-tattcaaaaaggtggagctgnnnt 779
Query: 1136 gcccagcaataaagatgttacctcattggattggaattgtgatggtaacttattggcaac 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gcccagcaataaagatgttacctcattggattggaattgtgatggtaacttattggcaac 839
Query: 1196 tggatcatatgatggctatgcaagaatctggacaactgatggcacattagcatctacctt 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tggatcatatgatggctatgcaagaatctggacaactgatggcacattagcatctacctt 899
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 340,390
Number of extensions: 6981
Number of successful extensions: 6981
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6980
Number of HSP's successfully gapped: 1
Length of query: 2518
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2501
Effective length of database: 8,119,229
Effective search space: 20306191729
Effective search space used: 20306191729
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)