BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15881 (UTR included)
(6211 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052B2H02 1477 0.0
BF01053A2G09 1263 0.0
>BF01052B2H02
Length = 828
Score = 1477 bits (745), Expect = 0.0
Identities = 763/769 (99%)
Strand = Plus / Plus
Query: 1552 aaatgtttcgactcaagatgatcctacgactgttgcaaatgtcttctttcaatggaaaaa 1611
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 11 aaatgtttcgactcaagatgatcctacggctgttgcaaatgtcttctttcaatggaaaaa 70
Query: 1612 tgtcggctttaaatgaaattaatcagttgataagtacaatatcacaacaaccaaaaccag 1671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgtcggctttaaatgaaattaatcagttgataagtacaatatcacaacaaccaaaaccag 130
Query: 1672 aatggcttactcccactgtcataacgaattggatacgcgaaaataaagttgtagatatag 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aatggcttactcccactgtcataacgaattggatacgcgaaaataaagttgtagatatag 190
Query: 1732 tgttgagggattctctgcatcaaccccagtatgtggaaaggttagaaaaaatgcttaggt 1791
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 191 tgttgagagattctctgcatcaaccccagtatgtggagaggttagaaaaaatgcttaggt 250
Query: 1792 ttatgatcaaagaaaactctttgacgagggacgacctggacgccatctggagggcgcaac 1851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttatgatcaaagaaaactctttgacgagggacgacctggacgccatctggagggcgcaac 310
Query: 1852 acggaaaacacgaggccatagtcaagaacctgcacgatctactcgccaaattagcttggg 1911
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 311 acggaaaacacgaggccatagtcaagaacctgcacgatcttctcgccaaattagcttggg 370
Query: 1912 actttacaccagatcaactcgatcatttatttgattgttttaaggctagttgggcaacat 1971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 actttacaccagatcaactcgatcatttatttgattgttttaaggctagttgggcaacat 430
Query: 1972 ccagcaagaaacagagcgataaactcttggaagtaatacgcagactagccgaagatgata 2031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ccagcaagaaacagagcgataaactcttggaagtaatacgcagactagccgaagatgata 490
Query: 2032 aagatggcgtcatggctaacaaagtgctggtgctcttttggaatttggcccattctgacg 2091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aagatggcgtcatggctaacaaagtgctggtgctcttttggaatttggcccattctgacg 550
Query: 2092 aagtatgcacggagattatggacgtggcgttagcgaatcttatcaaaatactcgactaca 2151
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aagtgtgcacggagattatggacgtggcgttagcgaatcttatcaaaatactcgactaca 610
Query: 2152 gttgcagccaagatcgtgatgcacaaaagatactgtggcttgataagtgcgtggaagagt 2211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gttgcagccaagatcgtgatgcacaaaagatactgtggcttgataagtgcgtggaagagt 670
Query: 2212 tgaaaagcaacgacaagtgggttctgccggcgttgaagatgatgcgtgagatctgctgtc 2271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tgaaaagcaacgacaagtgggttctgccggcgttgaagatgatgcgtgagatctgctgtc 730
Query: 2272 tgtacgacgcggggggcggggccggcgccaggccgcacgtgacgcgcca 2320
|||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tgtatgacgcggggggcggggccggcgccaggccgcacgtgacgcgcca 779
>BF01053A2G09
Length = 667
Score = 1263 bits (637), Expect = 0.0
Identities = 637/637 (100%)
Strand = Plus / Plus
Query: 3735 ccagccccacccaccgttgcctataatgttgaggtcctatatagcatggtgatgccatcg 3794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ccagccccacccaccgttgcctataatgttgaggtcctatatagcatggtgatgccatcg 71
Query: 3795 tcggagactagactagaaagaaatagaagtttccagctggcctgtgtaaaaaaagctccg 3854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tcggagactagactagaaagaaatagaagtttccagctggcctgtgtaaaaaaagctccg 131
Query: 3855 ctgttagtgcagtgcttatcagacaatgattttttgaaagatgctgcaccacacacgaga 3914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ctgttagtgcagtgcttatcagacaatgattttttgaaagatgctgcaccacacacgaga 191
Query: 3915 cgagtcggatatttagctttagtaagactggcgaaattggctttgtacacattgggacat 3974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cgagtcggatatttagctttagtaagactggcgaaattggctttgtacacattgggacat 251
Query: 3975 ttgtttgaaattcttgcaccagacggttccgacacctctttagataaagaatttaggatg 4034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttgtttgaaattcttgcaccagacggttccgacacctctttagataaagaatttaggatg 311
Query: 4035 gatgtgacaatattaagggaggcactgcaaactgttccgaatcataattgtgagcttgtt 4094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gatgtgacaatattaagggaggcactgcaaactgttccgaatcataattgtgagcttgtt 371
Query: 4095 gtaaaggcaattgccgaaaagctagccaacacccttggagagcagatggtgacaagcagt 4154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gtaaaggcaattgccgaaaagctagccaacacccttggagagcagatggtgacaagcagt 431
Query: 4155 gaagagagccactcagtatcgtcgttggtgtggtggcgcttgcccactatggccaccgtt 4214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gaagagagccactcagtatcgtcgttggtgtggtggcgcttgcccactatggccaccgtt 491
Query: 4215 cgcgccctctatggcctcgcctactctgtggcacaacccgacccagacggactagtgcac 4274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cgcgccctctatggcctcgcctactctgtggcacaacccgacccagacggactagtgcac 551
Query: 4275 tccgatgatgttatattggttcgagaatgtatggaagttgtcacgatttgcatggcgcta 4334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tccgatgatgttatattggttcgagaatgtatggaagttgtcacgatttgcatggcgcta 611
Query: 4335 ggaggaggacatctcgaatcacttctacatgaaacct 4371
|||||||||||||||||||||||||||||||||||||
Sbjct: 612 ggaggaggacatctcgaatcacttctacatgaaacct 648
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 83,608
Number of extensions: 9279
Number of successful extensions: 9279
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9279
Number of HSP's successfully gapped: 2
Length of query: 6211
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6193
Effective length of database: 8,109,745
Effective search space: 50223650785
Effective search space used: 50223650785
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)