BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15888 (UTR included)
(2368 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01018A2H07 1128 0.0
BF14_1229_C1 1055 0.0
>BF01018A2H07
Length = 613
Score = 1128 bits (569), Expect = 0.0
Identities = 603/613 (98%), Gaps = 1/613 (0%)
Strand = Plus / Plus
Query: 1309 ttttccaggaaatttacgaacgtgattacaagaagcaatttgaagatgccaaaatctggt 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ttttccaggaaatttacgaacgtgattacaagaagcaatttgaagatgccaaaatatggt 60
Query: 1369 acgaacatcgtctgatcgacgacatggttgctcaggctattaagagctcgggtgggttcg 1428
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 acgaacaccgtctgatcgacgacatggttgctcaggctatcaagagctcgggtgggttcg 120
Query: 1429 tgtgggcctgcaaaaactatgacggtgatgtacagtcagatgtcgttgcacagggttacg 1488
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 121 tgtgggcctgcaaaaactatgacggtgatgtacagtcagatgtcgttgcgcagggttacg 180
Query: 1489 gctcgttaggtatgatgacgtcagtgctcatgtgtccggatggtcggacggttgagtcgg 1548
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctcgttgggtatgatgacgtcagtgctcatgtgtccggatggtcggacggttgagtcgg 240
Query: 1549 aagcagcccacggtactgtgacacgtcactaccggatgcaccagcagggcaagcctacca 1608
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 aagcagcccacggtactgtgacacgtcactaccggatgcaccagcagggtaagcctacca 300
Query: 1609 gcaccaaccccgtcgcctctatatacgcttggaccagagggttgatgcaccgcgccaagc 1668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcaccaaccccgtcgcctctatatacgcttggaccagagggttgatgcaccgcgccaagc 360
Query: 1669 tcgataacactcccgagttggaaagattctctaaatcactggaagaggcctgtgtggagt 1728
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 361 tcgataacactcccgagttggaaaaattctctaaatcactggaagaggcctgtgtggagt 420
Query: 1729 gtatagacagcgggaagatgaccaaggatctagtgatctgtatccatggcatggccaaca 1788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtatagacagcgggaagatgaccaaggatctagtgatctgtatccatggcatggccaaca 480
Query: 1789 caaaggaagggatgtatctgaacaccgaggacttcctgcaggccattgccgaccaactcg 1848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caaaggaagggatgtatctgaacaccgaggacttcctgcaggccattgccgaccaactcg 540
Query: 1849 agcggaaactaaccaagtaac-tgatgtagatagagaatgatattgtcagttaattgaaa 1907
||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||
Sbjct: 541 agcggaaactaaccaagtaacttgatgtagatagagaatgatatcgccagttaattgaaa 600
Query: 1908 tttttatatctcc 1920
|||||||||||||
Sbjct: 601 tttttatatctcc 613
>BF14_1229_C1
Length = 821
Score = 1055 bits (532), Expect = 0.0
Identities = 541/544 (99%)
Strand = Plus / Minus
Query: 747 ctggactgcctgtactacgatcttggtctacctcaccgagacgccacgaatgatcaggtt 806
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ctggactgcttgtactacgatcttggtctacctcaccgagacgccacgaatgatcaggtt 485
Query: 807 accatagacgccgcccacgcgatccttaaacacaatgtgggcatcaaatgcgctaccatc 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 accatagacgccgcccacgcgatccttaaacacaatgtgggcatcaaatgcgctaccatc 425
Query: 867 acacccgacgagcagagggttgaagagtttaaattaaagaagatgtggctgagtccaaac 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 acacccgacgagcagagggttgaagagtttaaattaaagaagatgtggctgagtccaaac 365
Query: 927 gggacgattcgtaatattttggggggcaccgtgttcagggagcccattctatgcaagagt 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gggacgattcgtaatattttggggggcaccgtgttcagggagcccattctatgcaagagt 305
Query: 987 ataccgagagttgttcctggatggacgaatgctattgttattggccgtcatgctcacgga 1046
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 304 ataccgagagttgttcctggatggacgaatgctattgtcattggccgtcatgctcacgga 245
Query: 1047 gaccagtacaaggcgcaagactttgttatagcaaaacctggaaaggttgagatggtgtac 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gaccagtacaaggcgcaagactttgttatagcaaaacctggaaaggttgagatggtgtac 185
Query: 1107 acagcagcagatggttctgtagacaagagactgctgtatgacttcaaatcaccaggtgta 1166
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 184 acagcagcagatggttctgtagagaagagactgctgtatgacttcaaatcaccaggtgta 125
Query: 1167 gttcaaggaatgtacaataccgatgaatccatacaggctttcgcacactcaagtttccag 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gttcaaggaatgtacaataccgatgaatccatacaggctttcgcacactcaagtttccag 65
Query: 1227 gtcgctttgcaaaagaaatggcctttgtacctctcaaccaagaacacgatattgaagttc 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gtcgctttgcaaaagaaatggcctttgtacctctcaaccaagaacacgatattgaagttc 5
Query: 1287 tacg 1290
||||
Sbjct: 4 tacg 1
Score = 502 bits (253), Expect = e-141
Identities = 259/261 (99%)
Strand = Plus / Minus
Query: 457 atggaacagcaaaaagagttgtggcatcaaagcctgtggtggaaatggatggagatgaga 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 atggaacagcaaaaagagttgtggcatcaaagcctgtggtggaaatggatggagatgaga 601
Query: 517 tgacccgtataatttgggagaagattaaagagaaactcatatttccctatgttaagctgg 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tgacccgtataatttgggagaagattaaagagaaactcatatttccctatgttaagctgg 541
Query: 577 actgcctgtactacgatcttggtctacctcaccgagacgccacgaatgatcaggttacca 636
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 actgcttgtactacgatcttggtctacctcaccgagacgccacgaatgatcaggttacca 481
Query: 637 tagacgccgcccacgcgatcctcaaacacaatgtgggcatcaaatgcgctaccatcacac 696
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 480 tagacgccgcccacgcgatccttaaacacaatgtgggcatcaaatgcgctaccatcacac 421
Query: 697 ccgacgagcagagggttgaag 717
|||||||||||||||||||||
Sbjct: 420 ccgacgagcagagggttgaag 400
Score = 200 bits (101), Expect = 7e-51
Identities = 101/101 (100%)
Strand = Plus / Minus
Query: 1 ttctatcattttataaattttatttgtaagcatggttgtaaacggcacaaaacgattgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 ttctatcattttataaattttatttgtaagcatggttgtaaacggcacaaaacgattgtt 702
Query: 61 aaaatatgtttctgaacaaactattgtatcaagaagaaaat 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 aaaatatgtttctgaacaaactattgtatcaagaagaaaat 661
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 276,737
Number of extensions: 5880
Number of successful extensions: 5880
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5879
Number of HSP's successfully gapped: 4
Length of query: 2368
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2351
Effective length of database: 8,119,229
Effective search space: 19088307379
Effective search space used: 19088307379
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)