BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15896 (UTR included)
(1960 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043A2D04 896 0.0
BF01044A1A04 84 1e-15
>BF01043A2D04
Length = 806
Score = 896 bits (452), Expect = 0.0
Identities = 600/649 (92%), Gaps = 19/649 (2%)
Strand = Plus / Plus
Query: 642 ggagtaaaaagctggcccccgcttcctcccaaaccctggtcacatgtcctagatgctgca 701
|||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 65 ggagtaaaaagctggcccccacttcctcccaaaccctggtcatatgtcctagatgctgcg 124
Query: 702 gaacacggagctacttgcccacaatgggatatggtagctttgaaatttagaaaaggggaa 761
||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 125 gaacatggagctacacgcccacaatgggatatggtggctttgaaatttagaaaaggggaa 184
Query: 762 gagaactgtttattcattaatgtttacactcccaccttacaaactgactccaaattaccc 821
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gagaactgtttattcattaatgtttacactcccaccttacaaactgactccaaattacct 244
Query: 822 gtgatggtgtatatccacgagggaggctttcaatcgggatctggaaatgaaagaatgtat 881
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 245 gtgatggtgtatatcccaaagggaggctttcaattgggatctggaaatgaaagaatgtat 304
Query: 882 ggcccaaattttctgataaggcatgatgttattcttgtaacgtttaattatagattggaa 941
|||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 305 ggcctaaattttctgataaggcatgatgttattcttgttttgtttaattgtagattggat 364
Query: 942 ctattagggcttttatgtcttgacacccctgaagttcctggcaacgcaggtatgaaagat 1001
||||| ||| |||| |||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 365 ctatt-gggatttt-tgtcttgaca-ccctgaagttcctggcaacgcaggtatgaaaaat 421
Query: 1002 atggtagcagccctgagatgggttcaaaataatattaaacagttcgggggtgacccagat 1061
|||||||||| ||||||||||||||||||||| | |||| |||||
Sbjct: 422 atggtagcagtcctgagatgggttcaaaataacactaaa----------------cagat 465
Query: 1062 aatgtaacgatttttggagaaagtggtggagcagtttcagtgacttatcttatgctatct 1121
||| ||| |||| ||| || |||||||||||||||||||||||| |||||||||||||||
Sbjct: 466 aatttaatgattattgaagtaagtggtggagcagtttcagtgacctatcttatgctatct 525
Query: 1122 ccgatggctcaaggcttgtttcataaagctattgcacaaagtggatcatgtcttgccgat 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ccgatggctcaaggcttgtttcataaagctattgcacaaagtggatcatgtcttgccgat 585
Query: 1182 tatgcaatagatgttaatcctgtacagagagcttttcgagttggaaaggtccttgggaag 1241
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 586 tatgcaatagatgttaatcctgtacagagagcttttcgagttgggaaggtccttgggaag 645
Query: 1242 gatacgacagatccttatgagttactcacatatttacaaagcttgcctg 1290
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gatacgacagatccttatgagttactcacatatttacaaagcttgcctg 694
>BF01044A1A04
Length = 819
Score = 83.8 bits (42), Expect = 1e-15
Identities = 213/270 (78%)
Strand = Plus / Plus
Query: 1014 ctgagatgggttcaaaataatattaaacagttcgggggtgacccagataatgtaacgatt 1073
|||| |||||||||||||||||||||||| || || || ||||| | ||||| || |||
Sbjct: 13 ctgaaatgggttcaaaataatattaaacaatttggtggggaccctggcaatgtgacaatt 72
Query: 1074 tttggagaaagtggtggagcagtttcagtgacttatcttatgctatctccgatggctcaa 1133
||||||||||||| || | || ||| |||||||||| ||| | || || ||| || ||
Sbjct: 73 tttggagaaagtgcaggtggagcttcggtgacttatcacatgatgtcacctatgactaaa 132
Query: 1134 ggcttgtttcataaagctattgcacaaagtggatcatgtcttgccgattatgcaatagat 1193
|||||||| |||||||| || ||||| ||||| ||||| | |||||||| |||||
Sbjct: 133 ggcttgttccataaagcaatagcacagagtggcacatgtttgtgtgattatgctttagat 192
Query: 1194 gttaatcctgtacagagagcttttcgagttggaaaggtccttgggaaggatacgacagat 1253
| |||||||| | ||||| || ||||||||||| |||| ||||| || ||| | ||
Sbjct: 193 aatgatcctgtaaacagagccttcagagttggaaagttcctagggaaagacacggaaaat 252
Query: 1254 ccttatgagttactcacatatttacaaagc 1283
|| |||||||| | || ||||||||||||
Sbjct: 253 cccaatgagttattgacttatttacaaagc 282
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,791
Number of extensions: 4213
Number of successful extensions: 4213
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4211
Number of HSP's successfully gapped: 3
Length of query: 1960
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1943
Effective length of database: 8,119,229
Effective search space: 15775661947
Effective search space used: 15775661947
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)