BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15897 (UTR included)
(1471 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043A2D04 1037 0.0
>BF01043A2D04
Length = 806
Score = 1037 bits (523), Expect = 0.0
Identities = 593/615 (96%), Gaps = 1/615 (0%)
Strand = Plus / Plus
Query: 667 ccccgcttcctcccaaaccctggtcgcatgtcctagatgctgcagaacacggagctactt 726
|||| |||||||||||||||||||| |||||||||||||||| ||||| ||||||||
Sbjct: 81 ccccacttcctcccaaaccctggtcatatgtcctagatgctgcggaacatggagctacac 140
Query: 727 gcccacaatgggatatggtggctttgaaatttagaaaaggggaagagaactgtttattca 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gcccacaatgggatatggtggctttgaaatttagaaaaggggaagagaactgtttattca 200
Query: 787 ttaatgtttacactcccaccttacaaactgactccaaattacctgtgatggtgtatatcc 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaatgtttacactcccaccttacaaactgactccaaattacctgtgatggtgtatatcc 260
Query: 847 acgagggaggctttcaatcaggatctggaaatgaaagaatgtatggcccaaattttctga 906
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 caaagggaggctttcaattgggatctggaaatgaaagaatgtatggcctaaattttctga 320
Query: 907 taaggcatgatgttattcttgttttgtttaattgtagattggatctattgggatttttgt 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaggcatgatgttattcttgttttgtttaattgtagattggatctattgggatttttgt 380
Query: 967 cttgacagccctgaagttcctggcaacgcaggtatgaaagatatggtagcagtcctgaga 1026
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 cttgaca-ccctgaagttcctggcaacgcaggtatgaaaaatatggtagcagtcctgaga 439
Query: 1027 tgggttcaaaataacactaaacagataatttaatcattattggagtaagtggtggagcag 1086
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 440 tgggttcaaaataacactaaacagataatttaatgattattgaagtaagtggtggagcag 499
Query: 1087 tttccgtgacttgtcttatgatatctccgatggctcaaggcttgtttcataaagctattg 1146
|||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttcagtgacctatcttatgctatctccgatggctcaaggcttgtttcataaagctattg 559
Query: 1147 cacaaagtggatcatgtcttgccgattatgcaatagatgttaatcctgtacagagagctt 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cacaaagtggatcatgtcttgccgattatgcaatagatgttaatcctgtacagagagctt 619
Query: 1207 ttcgagttggaaaggtccttgggaaggatacgacagatccttatgagttactcacatatt 1266
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttcgagttgggaaggtccttgggaaggatacgacagatccttatgagttactcacatatt 679
Query: 1267 tacaaagcttgcctg 1281
|||||||||||||||
Sbjct: 680 tacaaagcttgcctg 694
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 1412 gttagatataatgttatctggaaaatataatcctgttcctcttataac 1459
|||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 694 gttagatacaatgttatctggaaaatttaatcctgttcctcttataac 741
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 188,539
Number of extensions: 3834
Number of successful extensions: 3834
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3833
Number of HSP's successfully gapped: 2
Length of query: 1471
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1454
Effective length of database: 8,119,229
Effective search space: 11805358966
Effective search space used: 11805358966
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)