BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15898 (UTR included)
(5047 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01006X1A01 1211 0.0
BF01043A2D04 1037 0.0
>BF01006X1A01
Length = 743
Score = 1211 bits (611), Expect = 0.0
Identities = 617/619 (99%)
Strand = Plus / Plus
Query: 1117 attgcgaagccatgtctcacataccgaatccgtataacaatgctcccgggacctacaact 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 attgcgaagccatgtctcacataccgaatccgtataacaatgctcccgggacctacaact 184
Query: 1177 caaatcctgctatgtttcaacaattcaatcaaacgctgacgagccaactgcctccgaaac 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 caaatcctgctatgtttcaacaattcaatcaaacgctgacgagccaactgcctccgaaac 244
Query: 1237 aagacacgaaaccaatcattcctacaagcattcaagggttcaaccaccaaacgaatccat 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aagacacgaaaccaatcattcctacaagcattcaagggttcaaccaccaaacgaatccat 304
Query: 1297 ataatgacgaaagtgccagcagttcgccagcttttaataatactggaatgatgccccttc 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ataatgacgaaagtgccagcagttcgccagcttttaataatactggaatgatgccccttc 364
Query: 1357 caacaagcttacagtcatcccccatgaggcccgttaagccagtgccaagtcaacagcagg 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 caacaagcttacagtcatcccccatgaggcccgttaagccagtgccaagtcaacagcagg 424
Query: 1417 ctcaaagcattcagaacattccactgagctcatccagcccacattcaatgaccaacacta 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctcaaagcattcagaacattccactgagctcatccagcccacattcaatgaccaacacta 484
Query: 1477 accaatcaaactctccatatcatcctcaataccatcaaatcaataataatgccccacctc 1536
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 accaatcacactctccatatcatcctcaataccatcaaatcaataataatgccccacctc 544
Query: 1537 taattccttctagtctaaacaaccagccaaacatgaatggtccaatgagtgccccaaatg 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 taattccttctagtctaaacaaccagccaaacatgaatggtccaatgagtgccccaaatg 604
Query: 1597 cactccctaatcaatatccagcagcatccaattcattcagtccagctcctatgaatcgcc 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cactccctaatcaatatccagcagcatccaattcattcagtccagctcctatgaatcgcc 664
Query: 1657 ctccgacaattaatactttcagtacaaatcaaagttatagaacaaatcacacatcccaaa 1716
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 665 ctccgacaattaatactttcagtacaaatcaaagttacagaacaaatcacacatcccaaa 724
Query: 1717 cttcatctcctcatgctgt 1735
|||||||||||||||||||
Sbjct: 725 cttcatctcctcatgctgt 743
>BF01043A2D04
Length = 806
Score = 1037 bits (523), Expect = 0.0
Identities = 593/615 (96%), Gaps = 1/615 (0%)
Strand = Plus / Plus
Query: 52 ccccgcttcctcccaaaccctggtcgcatgtcctagatgctgcagaacacggagctactt 111
|||| |||||||||||||||||||| |||||||||||||||| ||||| ||||||||
Sbjct: 81 ccccacttcctcccaaaccctggtcatatgtcctagatgctgcggaacatggagctacac 140
Query: 112 gcccacaatgggatatggtggctttgaaatttagaaaaggggaagagaactgtttattca 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gcccacaatgggatatggtggctttgaaatttagaaaaggggaagagaactgtttattca 200
Query: 172 ttaatgtttacactcccaccttacaaactgactccaaattacctgtgatggtgtatatcc 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaatgtttacactcccaccttacaaactgactccaaattacctgtgatggtgtatatcc 260
Query: 232 acgagggaggctttcaatcaggatctggaaatgaaagaatgtatggcccaaattttctga 291
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 caaagggaggctttcaattgggatctggaaatgaaagaatgtatggcctaaattttctga 320
Query: 292 taaggcatgatgttattcttgttttgtttaattgtagattggatctattgggatttttgt 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaggcatgatgttattcttgttttgtttaattgtagattggatctattgggatttttgt 380
Query: 352 cttgacagccctgaagttcctggcaacgcaggtatgaaagatatggtagcagtcctgaga 411
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 cttgaca-ccctgaagttcctggcaacgcaggtatgaaaaatatggtagcagtcctgaga 439
Query: 412 tgggttcaaaataacactaaacagataatttaatcattattggagtaagtggtggagcag 471
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 440 tgggttcaaaataacactaaacagataatttaatgattattgaagtaagtggtggagcag 499
Query: 472 tttccgtgacttgtcttatgatatctccgatggctcaaggcttgtttcataaagctattg 531
|||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttcagtgacctatcttatgctatctccgatggctcaaggcttgtttcataaagctattg 559
Query: 532 cacaaagtggatcatgtcttgccgattatgcaatagatgttaatcctgtacagagagctt 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cacaaagtggatcatgtcttgccgattatgcaatagatgttaatcctgtacagagagctt 619
Query: 592 ttcgagttggaaaggtccttgggaaggatacgacagatccttatgagttactcacatatt 651
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttcgagttgggaaggtccttgggaaggatacgacagatccttatgagttactcacatatt 679
Query: 652 tacaaagcttgcctg 666
|||||||||||||||
Sbjct: 680 tacaaagcttgcctg 694
Score = 79.8 bits (40), Expect = 4e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 797 gttagatataatgttatctggaaaatataatcctgttcctcttataac 844
|||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 694 gttagatacaatgttatctggaaaatttaatcctgttcctcttataac 741
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 383,618
Number of extensions: 6290
Number of successful extensions: 6290
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6289
Number of HSP's successfully gapped: 3
Length of query: 5047
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5029
Effective length of database: 8,109,745
Effective search space: 40783907605
Effective search space used: 40783907605
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)