BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15899 (UTR included)
(1657 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01004X1C03 551 e-156
>BF01004X1C03
Length = 310
Score = 551 bits (278), Expect = e-156
Identities = 302/310 (97%)
Strand = Plus / Plus
Query: 635 ttctgtgtatatctgcggggcgcactccctgccgggggcggtcagggatcttcgaccagg 694
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 ttctgtgtatatctgcggggcgcactccctgccaggggcggtcagggatcttcgaccagg 60
Query: 695 tctggtggtgaacgctgctccagaactaccaccacctccggaagactatgtaccgagaca 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctggtggtgaacgctgctccagaactaccaccacctccggaagactatgtaccgagaca 120
Query: 755 ctatgtaccgctgctggatacacccagctcagatatgcacccctacatggaaagggtcgc 814
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 121 ctacgtaccgctgctggatacacccagctcatatatgcacccctacatggaaagggtcgc 180
Query: 815 tgaccttataaatgatgtggttagcaacggtgaggttgtgttggtgcactgcgtggcggg 874
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 181 tgaccttataaatgatgtggttagcaacggtgaggttgtgttggtgcactgtgtcgcggg 240
Query: 875 gatatcaagatccgttactctgtgtctggcctacctcatcaaatggcacaagatgacttt 934
|||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 241 gatatcgagatccgttactctgtgtctggcctacctcgttaaatggcacaagatgacttt 300
Query: 935 gtgtgacgcc 944
||||||||||
Sbjct: 301 gtgtgacgcc 310
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,183
Number of extensions: 6807
Number of successful extensions: 6807
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6807
Number of HSP's successfully gapped: 1
Length of query: 1657
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1640
Effective length of database: 8,119,229
Effective search space: 13315535560
Effective search space used: 13315535560
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)