BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15900 (UTR included)
(1249 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2624_C1 1439 0.0
>BF14_2624_C1
Length = 790
Score = 1439 bits (726), Expect = 0.0
Identities = 774/790 (97%)
Strand = Plus / Plus
Query: 455 tcgacgacacttcttttactaagcgaagcatattaagtctattaatatgataccaaatga 514
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgacgacacttcttttactgagcgaagcatattaagtctattaatatgataccaaatga 60
Query: 515 aatttttgctgaagacatgatgagcactgtaatacgatacggattgtacattggcgctgc 574
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 aatttttgctgaagacatgatgagcactgtaatacgatacggattatacattggcgctgc 120
Query: 575 ttttcagattatatgtttgttagcctgtgtgacgctcacagatgaacaaagcgaatccca 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttttcagattatatgtttgttagcctgtgtgacgctcacagatgaacaaagcgaatccca 180
Query: 635 cccctatgaaaaggcctacacagacagtgacgagtgtagttcagagcagtcctctcctgg 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cccctatgaaaaggcctacacagacagtgacgagtgtagttcagagcagtcctctcctgg 240
Query: 695 tcatagagctgcaacatctcgggctagacgacatgacaagaagaagcgtcgttaggatgt 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcatagagctgcaacatctcgggctagacgacatgacaagaagaagcgtcgttaggatgt 300
Query: 755 agattttaatcaatgacaaattttaacagtttccatgattaagtatttttgttaatgatg 814
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agattttaatcactgacaaattttaacagtttccatgattaagtatttttgttaatgatg 360
Query: 815 actggtattctctcttatagctgtaacaactctcaaatttgaagagttagaccttatttt 874
||| |||||||||||||||||||||||| ||||||||||||| ||||||| ||||||
Sbjct: 361 actaatattctctcttatagctgtaacaagcctcaaatttgaagggttagacactatttt 420
Query: 875 ccaattttatttattattttgaaaatatgtgaattttctcaatatactctgattattgtc 934
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 ccaattttatttattatattgaaaatatgtgaattttctcaatatactctgattattgac 480
Query: 935 gcttaaatttcttgaaaaatatgtttgtatgattaatgtaatacttggaactctaatact 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcttaaatttcttgaaaaatatgtttgtatgattaatgtaatacttggaactctaatact 540
Query: 995 tctgaaagttctgtatactcttatactcccattagcagatatttaattgtaagtccagtg 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctgaaagttctgtatactcttatactcccattagcagatatttaattgtaagtccagtg 600
Query: 1055 tattactgggtttattctatgaatttactatgcatttaagtagtcctatactcagacata 1114
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 601 tattactgggtttattctatgaatttactatgcatttaagtagtcatatactcagacata 660
Query: 1115 ttagtcggtgtatagcatgctttgtttaatatattttaagatattttacgttcagtaaat 1174
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 661 ttagtcagtgtatagcatgctttgtttaatatattttaagatattttaagttcagtaaat 720
Query: 1175 agtgatattaatcatgatagaaatactgttgatttgcaactatttttttaccgggatatc 1234
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 721 agtgatattaatcatgatagaaatactgttgatttgcaaatatttttttaccgggatatc 780
Query: 1235 attgtatctc 1244
||||||||||
Sbjct: 781 attgtatctc 790
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 189,299
Number of extensions: 4312
Number of successful extensions: 4312
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4312
Number of HSP's successfully gapped: 1
Length of query: 1249
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1232
Effective length of database: 8,119,229
Effective search space: 10002890128
Effective search space used: 10002890128
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)