BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15906 (UTR included)
(1756 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A2A12 1382 0.0
>BF01026A2A12
Length = 780
Score = 1382 bits (697), Expect = 0.0
Identities = 768/797 (96%), Gaps = 17/797 (2%)
Strand = Plus / Plus
Query: 725 ccttgacagtcgacgagctagcagccgcgggataataccaaaagcgaaaataaagactgt 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccttgacagtcgacgagctagcagccgcgggataataccaaaagcgaaaataaagactgt 60
Query: 785 caagatgaccttcgtgattgtattcgtgttcgtgctgtgctggtctccttatatgatatt 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caagatgaccttcgtgattgtattcgtgttcgtgctgtgctggtctccttatatgatatt 120
Query: 845 cgacctgctgcaagtgtacggctacgtcccggacactcaggccaacatagccatcgcctc 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgacctgctgcaagtgtacggctacgtcccggacactcaggccaacatagccatcgcctc 180
Query: 905 tctcatccaaagcctcgcaccgctgaactcggccgctaacccagttatttatttcatatt 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctcatccaaagcctcgcaccgctgaactcggccgctaacccagttatttatttcatatt 240
Query: 965 ctccaatagaatatttattagtctccggaacattcctccctacaagtggctctggtgttg 1024
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 ctccaatagaatatttattagtctacggaacattcctccctacaagtggctctggtgttg 300
Query: 1025 gatgaagaccggtgaaacaacgaccgagtccaaagcccacactgaactcctcacctcctc 1084
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 301 gatgaagaccggtgaaacaacgaccgagtccaaagcccacactgaactactcacctcctc 360
Query: 1085 acaccgaaaaacaagacacgacctcacgatccgagttaaaaatgacagtttgagggagca 1144
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 361 acaccgaaaaacaagacacgacctcacgatccgagttaaaaatgacagcttgagggagca 420
Query: 1145 gaagcagaggcttcatcagtgtaacagttcccggaaggttcgtctccacctgccgggaca 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaagcagaggcttcatcagtgtaacagttcccggaaggttcgtctccacctgccgggaca 480
Query: 1205 ggccatcaacaataacgtgccacaagcacgacgtgctgacaccttcttataattatactg 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggccatcaacaataacgtgccacaagcacgacgtgctgacaccttcttataattatactg 540
Query: 1265 tatacaataaggccaccgagaagagataaaatttataaacaaactttaagcggtttaata 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatacaataaggccaccgagaagagataaaatttataaacaaactttaagcggtttaata 600
Query: 1325 cgaatccaaaaattctcaagataaaaataaaaacaatacgataactcagttttcatggct 1384
|||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 601 cgaatccaaagaatctcaagataaaaataaaaaaaatacgataactcagttttcatggct 660
Query: 1385 ctcattaaaaggtattgatgtttgttttggaaacagattaatataaagtttaaattccaa 1444
||||||||||||||||||||||||||| | ||| |||||||
Sbjct: 661 ctcattaaaaggtattgatgtttgtttcgnnnncag-----------------attccaa 703
Query: 1445 aattaaaatatataccgtccttgatagatgatctttttttatatttttactttgatatgt 1504
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 aattaaaacatataccgtccttgatagatgatctttttttatatttttactttgatatgt 763
Query: 1505 aaagcaaataatgctag 1521
|||||||||||||||||
Sbjct: 764 aaagcaaataatgctag 780
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 256,949
Number of extensions: 5463
Number of successful extensions: 5463
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5463
Number of HSP's successfully gapped: 2
Length of query: 1756
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1739
Effective length of database: 8,119,229
Effective search space: 14119339231
Effective search space used: 14119339231
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)