BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15922 (UTR included)
(2284 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014B2D12 84 1e-15
>BF01014B2D12
Length = 734
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 1980 acacatacacacacacacacgcacaccaacacacacacacacacacacactctcacacac 2039
||||| |||||||||||||| ||||| |||||||||||||||||||||| | |||||||
Sbjct: 94 acacacacacacacacacacacacacacacacacacacacacacacacacacacacacac 153
Query: 2040 acactc 2045
||||||
Sbjct: 154 acactc 159
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1979 aacacatacacacacacacacgcacaccaacacacacacacacacacacactctcacaca 2038
|||||| |||||||||||||| ||||| |||||||||||||||||||||| | ||||||
Sbjct: 87 aacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca 146
Query: 2039 cacac 2043
|||||
Sbjct: 147 cacac 151
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 1988 acacacacacacgcacaccaacacacacacacacacacacactctcacacacacac 2043
|||||||||||| ||||| ||||||||||||||||||||||| | |||||||||||
Sbjct: 68 acacacacacacacacacaaacacacacacacacacacacacacacacacacacac 123
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 1980 acacatacacacacacacacgcacaccaacacacacacacacacacacactctcacacac 2039
||||| |||||||||||||| ||||| |||||||||||||||||||||| | |||||||
Sbjct: 82 acacaaacacacacacacacacacacacacacacacacacacacacacacacacacacac 141
Query: 2040 acac 2043
||||
Sbjct: 142 acac 145
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 1980 acacatacacacacacacacgcacaccaacacacacacacacacacacactctcacacac 2039
||||| |||||||||||||| ||||| |||||||||||||||||||||| | |||||||
Sbjct: 90 acacacacacacacacacacacacacacacacacacacacacacacacacacacacacac 149
Query: 2040 acac 2043
||||
Sbjct: 150 acac 153
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 1980 acacatacacacacacacacgcacaccaacacacacacacacacacacactctcacacac 2039
||||| |||||||||||||| ||||| |||||||||||||||||||||| | |||||||
Sbjct: 92 acacacacacacacacacacacacacacacacacacacacacacacacacacacacacac 151
Query: 2040 acac 2043
||||
Sbjct: 152 acac 155
Score = 77.8 bits (39), Expect = 7e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1980 acacatacacacacacacacgcacaccaacacacacacacacacacacactctcacacac 2039
||||| |||||||||||||| ||||| |||||||||||||||||||||| |||||| ||
Sbjct: 106 acacacacacacacacacacacacacacacacacacacacacacacacacactcacaaac 165
Query: 2040 aca 2042
|||
Sbjct: 166 aca 168
Score = 75.8 bits (38), Expect = 3e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 1986 acacacacacacacgcacaccaacacacacacacacacacacactctcacacacacac 2043
|||||||||||||| ||||| |||||||||||||||||||| || | |||||||||||
Sbjct: 46 acacacacacacacacacacaaacacacacacacacacacaaacacacacacacacac 103
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1979 aacacatacacacacacacacgcacaccaacacacacacacacacacacactctcacaca 2038
|||||| ||||||||||||| ||||| |||||||||||||||||||||| | ||||||
Sbjct: 67 aacacacacacacacacacaaacacacacacacacacacacacacacacacacacacaca 126
Query: 2039 cacac 2043
|||||
Sbjct: 127 cacac 131
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 1980 acacatacacacacacacacgcacaccaacacacacacacacacacacactctcacacac 2039
||||| ||||||||||| || ||||| |||||||||||||||||||||| | |||||||
Sbjct: 70 acacacacacacacacaaacacacacacacacacacacacacacacacacacacacacac 129
Query: 2040 acac 2043
||||
Sbjct: 130 acac 133
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 1980 acacatacacacacacacacgcacaccaacacacacacacacacacacactctcacacac 2039
||||| ||||||||| |||| ||||| |||||||||||||||||||||| | |||||||
Sbjct: 72 acacacacacacacaaacacacacacacacacacacacacacacacacacacacacacac 131
Query: 2040 acac 2043
||||
Sbjct: 132 acac 135
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 1980 acacatacacacacacacacgcacaccaacacacacacacacacacacactctcacacac 2039
||||| ||||||| |||||| ||||| |||||||||||||||||||||| | |||||||
Sbjct: 74 acacacacacacaaacacacacacacacacacacacacacacacacacacacacacacac 133
Query: 2040 acac 2043
||||
Sbjct: 134 acac 137
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 1980 acacatacacacacacacacgcacaccaacacacacacacacacacacactctcacacac 2039
||||| ||||| |||||||| ||||| |||||||||||||||||||||| | |||||||
Sbjct: 76 acacacacacaaacacacacacacacacacacacacacacacacacacacacacacacac 135
Query: 2040 acac 2043
||||
Sbjct: 136 acac 139
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 1980 acacatacacacacacacacgcacaccaacacacacacacacacacacactctcacacac 2039
||||| ||| |||||||||| ||||| |||||||||||||||||||||| | |||||||
Sbjct: 78 acacacacaaacacacacacacacacacacacacacacacacacacacacacacacacac 137
Query: 2040 acac 2043
||||
Sbjct: 138 acac 141
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 1980 acacatacacacacacacacgcacaccaacacacacacacacacacacactctcacacac 2039
||||| |||||||||||||| ||||| |||||||||||||||||||||| | ||||| |
Sbjct: 100 acacacacacacacacacacacacacacacacacacacacacacacacacacacacactc 159
Query: 2040 aca 2042
|||
Sbjct: 160 aca 162
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 267,421
Number of extensions: 6330
Number of successful extensions: 6330
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6310
Number of HSP's successfully gapped: 15
Length of query: 2284
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2267
Effective length of database: 8,119,229
Effective search space: 18406292143
Effective search space used: 18406292143
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)