BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15925 (UTR included)
(1684 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1647_C1 1645 0.0
>BF14_1647_C1
Length = 1275
Score = 1645 bits (830), Expect = 0.0
Identities = 884/902 (98%)
Strand = Plus / Plus
Query: 783 gtgttcagtctgctgggtttcatctgcattcaattctctcacttcaacaacgcgagcaag 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 gtgttcagtctgctgggtttcatctgcattcaattctctcacttcaacaacgcgagcaag 147
Query: 843 ggtctgttcttcagctggatatcgatgatcgcgttctggttcaccggcatcctgctgggc 902
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 148 ggtctgttcttcagctggatatcgatgatcgcgttctggttcaccggcatcctgctaggc 207
Query: 903 ttctacctgttccacatcgtggagaagttctacaagatcccgtggttgaagatcgagctg 962
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 208 ttctacctgttccacatcgtggagaagttctacaagatcccgtggctgaagatcgagctg 267
Query: 963 ctgttcacggcgctgtggacgttcctctaccttctggctgccgtgctcgccgtcaccgta 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ctgttcacggcgctgtggacgttcctctaccttctggctgccgtgctcgccgtcaccgta 327
Query: 1023 cacgacaacccccacgcggcagcagcgttctttggtttctcctgtacgttggcgtactgt 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cacgacaacccccacgcggcagcagcgttctttggtttctcctgtacgttggcgtactgt 387
Query: 1083 gtggatgcttacctcaaatggagagcagctcgggccgggggcctggctcagggcacgagg 1142
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 388 gtggatgcttacctcaaatggagagcagctcgggccggggggctggctcagggcactagg 447
Query: 1143 gtcgtctccaaacagactaccgtcaccagggaaggatattaaaactaacatgcacctaac 1202
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gtcgtctcgaaacagactaccgtcaccagggaaggatattaaaactaacatgcacctaac 507
Query: 1203 attacactatcatagtttgactaacacatgacactagtgtaatacggtccgcatctgaat 1262
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 508 attacactatcatagtttgacaaacacatgacactagtgtaatatggtccgcatctgaat 567
Query: 1263 cttacatttcgagcttagtgacaattttgttgaataaacttttctaatgcattatattaa 1322
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cttacaattcgagcttagtgacaattttgttgaataaacttttctaatgcattatattaa 627
Query: 1323 ttttaaatgcacaccaaactattgaatgtcatacatgttctgtaagtcttgtaaattatc 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ttttaaatgcacaccaaactattgaatgtcatacatgttctgtaagtcttgtaaattatc 687
Query: 1383 atattttttatcagtcgctgaacgtgttacatgtccctacacactactttgtgtcattac 1442
||||||||||||| | |||||| | ||||||||||||||||||||||||||||||| |||
Sbjct: 688 atattttttatcaattgctgaaagagttacatgtccctacacactactttgtgtcaatac 747
Query: 1443 aagctaacatcctttgtattattatataatatttgttattctctttacatgtcataacat 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aagctaacatcctttgtattattatataatatttgttattctctttacatgtcataacat 807
Query: 1503 aggaagagacgagcacgggacaccaacactatggtgtgtgtcactgctgtactcatgtta 1562
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 808 agaaagagacgagcacgggacaccaacactatggtgtgtgtcactgatgtactcatgtta 867
Query: 1563 ttaagtattttttatatattcacaatcagagttaatttagttttaagtaaacctgtgtac 1622
||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ttaggtattttttatataaccacaatcagagttaatttagttttaagtaaacctgtgtac 927
Query: 1623 ttaacctctctagttataggtagtatgttaagttcagtttgtgttcaatactttatcgtt 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 ttaacctctctagttataggtagtatgttaagttcagtttgtgttcaatactttatcgtt 987
Query: 1683 ga 1684
||
Sbjct: 988 ga 989
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 241,814
Number of extensions: 7021
Number of successful extensions: 7021
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7021
Number of HSP's successfully gapped: 1
Length of query: 1684
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1667
Effective length of database: 8,119,229
Effective search space: 13534754743
Effective search space used: 13534754743
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)