BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15934 (UTR included)
(3964 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010A2E09 547 e-155
>BF01010A2E09
Length = 838
Score = 547 bits (276), Expect = e-155
Identities = 279/280 (99%)
Strand = Plus / Plus
Query: 569 ggttgcaactgttcgtcgttgggttccgagagcaatgtgtgcgacatacgctcggggcag 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ggttgcaactgttcgtcgttgggttccgagagcaatgtgtgcgacatacgctcggggcag 305
Query: 629 tgtcgctgcagaccgcacgtcaccggccgagcttgtgacacctgcgaggaaggctactgg 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgtcgctgcagaccgcacgtcaccggccgagcttgtgacacctgcgaggaaggctactgg 365
Query: 689 ggtctccagcatggagggtgtcgtcgctgcgagtgtggtgcaggggctgcggcctgtgac 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggtctccagcatggagggtgtcgtcgctgcgagtgtggtgcaggggctgcggcctgtgac 425
Query: 749 cctgtcagcggcctgtgcgcctgttccgttggtgtgggaggtgcaaggtgtgaccgatgc 808
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 426 cctgtcagcggcctgtgcgcctgttccgttggtgtgggaggtgcgaggtgtgaccgatgc 485
Query: 809 ctcagcggctactatggttttggacccaccggatgtttac 848
||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ctcagcggctactatggttttggacccaccggatgtttac 525
Score = 361 bits (182), Expect = 6e-99
Identities = 210/221 (95%)
Strand = Plus / Plus
Query: 849 tgcacgcccgggtactggggacgaatcgccggctgtcacacatgtgactgtggaccggga 908
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 618 tgcacgcccgggtactggggacgaaccgccggctgtcacacatgtgattgtggaccggga 677
Query: 909 gccgtaggaggtaactgtgaccccgtgtccggccagtgtagttgtcgccctggctggacc 968
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gccgtannnnntaactgtgaccccgtgtccggccagtgtagttgtcgccctggctggacc 737
Query: 969 ggtcgcgcgtgtgaccgctgcgctcgcgcacactacggtcctcgctgcagaccttgcggc 1028
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 738 ggtcgcgcgtgtgaccgctgcgctcgggcacactacggtcctcgctgcagaccttgcggc 797
Query: 1029 tgtcaccgagcgggcacgcggtgtgaagatgggctgtgtcc 1069
||||| |||||||||||||||||||| ||||| ||||||||
Sbjct: 798 tgtcatcgagcgggcacgcggtgtgacgatggactgtgtcc 838
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 304,628
Number of extensions: 4791
Number of successful extensions: 4791
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4790
Number of HSP's successfully gapped: 2
Length of query: 3964
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3946
Effective length of database: 8,109,745
Effective search space: 32001053770
Effective search space used: 32001053770
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)