BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15941 (UTR included)
(2617 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1441_C1 2274 0.0
>BF14_1441_C1
Length = 1173
Score = 2274 bits (1147), Expect = 0.0
Identities = 1168/1174 (99%), Gaps = 2/1174 (0%)
Strand = Plus / Plus
Query: 544 tcgccgacccctggtggagcaaggctatctactacagattactagtggactcatttaagg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcgccgacccctggtggagcaaggctatctactacagattactagtggactcatttaagg 61
Query: 604 acctcgacggaaacggccttggagatttagaaggagctacaaaacagctaagttacgtac 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 acctcgacggaaacggccttggagatttagaaggagctacaaaacagctaagttacgtac 121
Query: 664 gcgctatcggagctgatgctgtaatcttatctcccatctccgagaaaagcttggactgta 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gcgctatcggagctgatgctgtaatcttatctcccatctccgagaaaagcttggactgta 181
Query: 724 attcacccgggaccatcgattttgttaacattgaaacaagatatggtactatcgataact 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 attcacccgggaccatcgattttgttaacattgaaacaagatatggtactatcgataact 241
Query: 784 ttaatgcactgctggctaaagcaaataaattagagctcaaagttttgataacattacaac 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttaatgcactgctggctaaagcaaataaattagagctcaaagttttgataacattacaac 301
Query: 844 tacaaactataagttcaaactcaattttatttaattcaagcgccgaaagaaagactggct 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tacaaactataagttcaaactcaattttatttaattcaagcgccgaaagaaagactggct 361
Query: 904 ttgaagatggaattgtatggatcagtggagcagctgaggaagcaccggccagtcgagcgt 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttgaagatggaattgtatggatcagtggagcagctgaggaagcaccggccagtcgagcgt 421
Query: 964 ttagaaactggacgtggcatgaatacagaggagcttattatgcaactgttaacaaagagg 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttagaaactggacgtggcatgaatacagaggagcttattatgcaactgttaacaaagagg 481
Query: 1024 cgatattaaatatttgctctgaaagtgtcgttgcgatgctatctgaagctatgtgcgagt 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cgatattaaatatttgctctgaaagtgtcgttgcgatgctatctgaagctatgtgcgagt 541
Query: 1084 ggttgaagaggggagccgctggagttctgcttaatcctgactttttaatgaattacgaat 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ggttgaagaggggagccgctggagttctgcttaatcctgactttttaatgaattacgaat 601
Query: 1144 gtggtcaaaaacttgtcaaaaggatagcgaaagaggccgtggcctgctcggggaatcaac 1203
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 602 gtggtcaaaaacttgtcaaaaggatagcgaaagaggccgcggcctgctcggggaatcaac 661
Query: 1204 attatgatctgccggttattttagtagaatcctctctggaggcggaagtcgctactaaat 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 attatgatctgccggttattttagtagaatcctctctggaggcggaagtcgctactaaat 721
Query: 1264 attacgctgagggcggtgtaggtgccaatagcgtaataagttatgccttttctacaaaag 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 attacgctgagggcggtgtaggtgccaatagcgtaataagttatgccttttctacaaaag 781
Query: 1324 ccaaacggccggctgttggcttggcgctcgacctgcacgcagcgctgttgtattcaccac 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ccaaacggccggctgttggcttggcgctcgacctgcacgcagcgctgttgtattcaccac 841
Query: 1384 aagatacgacccccgcttggctcaccagcacatccgacggaaaccggatagcaactcgtt 1443
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 842 aagatacgacccccgcttggctcaccag--catccgacggaaaccggatagcaactcgtt 899
Query: 1444 atggcagcgaaatggttgatgctataatactattaactttgattcttcctggctctgtta 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 atggcagcgaaatggttgatgctataatactattaactttgattcttcctggctctgtta 959
Query: 1504 tcattcaacaaggagatgagctaggagttgcagacaccatacttgattggacaaatacta 1563
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 960 tcattcaacaaggagatgagctaggagttgcagacactatacttgattggacaaatacta 1019
Query: 1564 ccaattgttggccaatgaattacataccttcggctgctccttttccatgggataatagcc 1623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 ccaattgttggccaatgaattacataccttcggctgctccttttccatgggataatagcc 1079
Query: 1624 ctaaagctaattttactacgggagaaccctggatgccgctgcctccaaattacaggtata 1683
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1080 ctaaagctaattttactaagggagaaccctggatgccgttgcctccaaattacaggtata 1139
Query: 1684 agaacgcaaaatctgaatatggtaatgaattgag 1717
||||||||||||||||||||||||||||||||||
Sbjct: 1140 agaacgcaaaatctgaatatggtaatgaattgag 1173
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 288,938
Number of extensions: 4724
Number of successful extensions: 4724
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4723
Number of HSP's successfully gapped: 1
Length of query: 2617
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2600
Effective length of database: 8,119,229
Effective search space: 21109995400
Effective search space used: 21109995400
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)