BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN15962 (UTR included)
(1705 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037A2C06 1441 0.0
BF14_60_C1 133 1e-30
>BF01037A2C06
Length = 815
Score = 1441 bits (727), Expect = 0.0
Identities = 756/767 (98%)
Strand = Plus / Plus
Query: 338 tttgactaagaaataacaataattgatagcggagtggtaaatcaaatgacagtgacaagc 397
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 49 tttgactaagaaataacaataattgatagcggagtggtgaatcaaatgacagtgacaagc 108
Query: 398 agttttaaatctcattcatcaagcactttccttgttttcatacttagtagctttaaagct 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 agttttaaatctcattcatcaagcactttccttgttttcatacttagtagctttaaagct 168
Query: 458 tgaacaaaacatgttttcaaaagaggaatcattcactacaagaatgcgttacgaaacgcg 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tgaacaaaacatgttttcaaaagaggaatcattcactacaagaatgcgttacgaaacgcg 228
Query: 518 aaaaattcactccgttagtgatgcattggtgaatgcgaaatttgcactttctttaaaaga 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 229 aaaaattcactccgttagtgatgcattggtgaatgcgaaatttgcactttctttaaagga 288
Query: 578 tccttccgtttggggcggaggtttatttgtgttttatcacatttttgcatatttagaaga 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tccttccgtttggggcggaggtttatttgtgttttatcacatttttgcatatttagaaga 348
Query: 638 tgccaaagacaagttaaatgtgccagaactcaaaaaaatatttgttgatccagtcatgga 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tgccaaagacaagttaaatgtgccagaactcaaaaaaatatttgttgatccagtcatgga 408
Query: 698 gagaaagaatgaatttgaagtggacctagcagaatatttgggtgaagattggtctctttt 757
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gagaaagaacgaatttgaagtggacctagcagaatatttgggtgaagattggtctctttt 468
Query: 758 gccaaagtcacccgaactagagaattatttacagcatttaaaaaatctggaaagagacaa 817
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 469 gccaaagtcacctgaactagagaattatttacagcatttaaaaaatctggaaagagataa 528
Query: 818 gcctattttattattggcatatatatatcatttatatttaggcatgctgagtggcggtca 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gcctattttattattggcatatatatatcatttatatttaggcatgctgagtggcggtca 588
Query: 878 aatattggctaagaaacgtaatctatttggggaagcagatcaagagaaacctcggaagta 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aatattggctaagaaacgtaatctatttggggaagcagatcaagagaaacctcggaagta 648
Query: 938 tcaagacagagtgacatgtttcggaaatgttgacatcggagaattgaaaaagaaaatgaa 997
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 649 tcaagacagagtgacatgtttcgnnnntgttgacatcggagaattgaaaaagaaaatgaa 708
Query: 998 acaggcgatgaatgaaatcgccgaaaacatgtcggaggatgagaaacttgaatttattga 1057
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 709 acaggcaatgaatgaaatcgccgaaaacatgacggaggatgagaaacttgaatttattga 768
Query: 1058 agaaagcaatcatgtgtttataatgaataatttagttgttaattcta 1104
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 agaaagcaatcatgtgtttataatgaataatttagttgttaattcta 815
>BF14_60_C1
Length = 829
Score = 133 bits (67), Expect = 1e-30
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1631 ggactcataatttagaatgacattcatattacataaaaaataaaagactgattacaccta 1690
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4 ggactcataatttagaatgacattcatattacataaaaaataaaagactgaatacaccta 63
Query: 1691 aatgtaatcgt 1701
|||||||||||
Sbjct: 64 aatgtaatcgt 74
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 276,472
Number of extensions: 6242
Number of successful extensions: 6242
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6242
Number of HSP's successfully gapped: 2
Length of query: 1705
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1688
Effective length of database: 8,119,229
Effective search space: 13705258552
Effective search space used: 13705258552
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)